| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yjjG [C]
Identifier: 15922472
GI number: 15922472
Start: 2144758
End: 2145417
Strand: Direct
Name: yjjG [C]
Synonym: ST2145
Alternate gene names: 15922472
Gene position: 2144758-2145417 (Clockwise)
Preceding gene: 15922471
Following gene: 15922473
Centisome position: 79.59
GC content: 28.64
Gene sequence:
>660_bases ATGAGAAAAATCATATTTGTTGACATGGGAGAAACCTTAGTAAGCTTTTCACCAAAATTTCATCAGCCCATATATTATTT TCTAGTTAAAAAAGGATATAATGTATCAGAGAAAAAGGTATTCAGAACAGTATATAAGTTACTTGGAAAAGACCACTTTC CCGATCCTATTTTAGGTGGTCTAAGTGTATTAGATTATAAAGAACTTTTATCAGAACTGAATATTACTCCAAGGAAATGC TTATTAGAAGAATTAAAAAATATTCCACTATTATCAGATAAATGGGAATTATTCGAGGACTCTGAACCCTTTCTCAAGAA ATTAAAAGATGAGAATTTTAAAATAGTTATGATAACTAATTCTACTAGATCTGTTTATAGAATTGTATCCGATTTAGGAT TAGATAAATATCTCGATGATATCATAGCTTCATGTGATTATGGTATAATGAAACCACATCCTAGAATTTTTAGAATAGCT ATAGAAAAACATGGAAAACCGATACTACATGTAGGGGATGTCTATGAAATTGATTATTTAGGAGCCATAAGGGCTGGTAT ATCTCCTGTACTTTTAGATAGGTTTAATTTTTATGAAGATCTAAAAGTTAATAAGGTGAAAAATCTATTTCAACTTCTAG GATTAATAAAAAATCATTAG
Upstream 100 bases:
>100_bases GATACATTTTTAACTTAGAAATTCCTAAAAAACCAAGTAAATGCCCAAGATGTAAAAGTGAAAATATAGAACCACCTAAG TTTCTAATCAGGGATAAAAA
Downstream 100 bases:
>100_bases AGATCTTACTTGAAGAAGTTCCTCCTCATCCTAACCCAAAGTATAATCTAGAACAATATATGACACCTTCTTATTTAGCC TCTGAGATAATTTGGGCAGC
Product: hypothetical protein
Products: (R)-2-hydroxyacid; halide
Alternate protein names: Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase IA Family Protein; 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase Subfamily IA; REG-2-Like HAD Superfamily Hydrolase
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRKIIFVDMGETLVSFSPKFHQPIYYFLVKKGYNVSEKKVFRTVYKLLGKDHFPDPILGGLSVLDYKELLSELNITPRKC LLEELKNIPLLSDKWELFEDSEPFLKKLKDENFKIVMITNSTRSVYRIVSDLGLDKYLDDIIASCDYGIMKPHPRIFRIA IEKHGKPILHVGDVYEIDYLGAIRAGISPVLLDRFNFYEDLKVNKVKNLFQLLGLIKNH
Sequences:
>Translated_219_residues MRKIIFVDMGETLVSFSPKFHQPIYYFLVKKGYNVSEKKVFRTVYKLLGKDHFPDPILGGLSVLDYKELLSELNITPRKC LLEELKNIPLLSDKWELFEDSEPFLKKLKDENFKIVMITNSTRSVYRIVSDLGLDKYLDDIIASCDYGIMKPHPRIFRIA IEKHGKPILHVGDVYEIDYLGAIRAGISPVLLDRFNFYEDLKVNKVKNLFQLLGLIKNH >Mature_219_residues MRKIIFVDMGETLVSFSPKFHQPIYYFLVKKGYNVSEKKVFRTVYKLLGKDHFPDPILGGLSVLDYKELLSELNITPRKC LLEELKNIPLLSDKWELFEDSEPFLKKLKDENFKIVMITNSTRSVYRIVSDLGLDKYLDDIIASCDYGIMKPHPRIFRIA IEKHGKPILHVGDVYEIDYLGAIRAGISPVLLDRFNFYEDLKVNKVKNLFQLLGLIKNH
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.8.1.2
Molecular weight: Translated: 25484; Mature: 25484
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIIFVDMGETLVSFSPKFHQPIYYFLVKKGYNVSEKKVFRTVYKLLGKDHFPDPILGG CCEEEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH LSVLDYKELLSELNITPRKCLLEELKNIPLLSDKWELFEDSEPFLKKLKDENFKIVMITN HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCEEEEEEEC STRSVYRIVSDLGLDKYLDDIIASCDYGIMKPHPRIFRIAIEKHGKPILHVGDVYEIDYL CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCEEEECCEEEHHHH GAIRAGISPVLLDRFNFYEDLKVNKVKNLFQLLGLIKNH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKIIFVDMGETLVSFSPKFHQPIYYFLVKKGYNVSEKKVFRTVYKLLGKDHFPDPILGG CCEEEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH LSVLDYKELLSELNITPRKCLLEELKNIPLLSDKWELFEDSEPFLKKLKDENFKIVMITN HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCCCCEEEEEEEC STRSVYRIVSDLGLDKYLDDIIASCDYGIMKPHPRIFRIAIEKHGKPILHVGDVYEIDYL CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCEEEECCEEEHHHH GAIRAGISPVLLDRFNFYEDLKVNKVKNLFQLLGLIKNH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-2-haloacid; H2O
Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA