| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yxxF [H]
Identifier: 15922407
GI number: 15922407
Start: 2090993
End: 2091817
Strand: Direct
Name: yxxF [H]
Synonym: ST2085
Alternate gene names: 15922407
Gene position: 2090993-2091817 (Clockwise)
Preceding gene: 15922405
Following gene: 15922408
Centisome position: 77.59
GC content: 41.82
Gene sequence:
>825_bases ATGAAGAGGTTAGGGATAGTCGAAATGATAGTTACAACTGTGATATGGGGCAGCATACCGATCTTGGCCCTATTGTCAGA CTTGCCGTCACCTGTTTTCGTATTCTTCAGGGTTTTTCTCACTTCCCTCTTCCTTTTCCCAATAGTAAAGAAGATAAGAC CAAAGCTCCTGCTGAAAATTACAATATTACTTTCAGGCCTATCATTAGCCCTTAACTGGATATTTCTGTTTTATTCTATA AGATTAGTTCAGGTATCTGAGGCAATATTACTGTATTATACGGGGCCGATATTTGCAACAATAATCATGCACTTCTTAGG GGAGAGGATAAACGGGGTAAAGTTAATATCGATCCTTCTAGCTTTCGGCGGGATAATACTAATCCTCGATCCCACCGAAA TGAGCCTAAATTTAGGCATATATGTCGCGTTGCTCAGCGGCCTCTTTTACGGCATTTTAGCTGTAACCAGCAAGCTCTCG ACTAAGCTCGTCAGCTCCAAGGAACTTGTGCTCTACCAAACCATAATAGCTAGCGCGCTTACCTTCCCGTTCTTGTTCGC GTTTAAGTTCTCGTTCACGCTTTACACGGCTATAATAGTCTTGGTAGCAGCACTGGTTAACACCCTTTTAGCCCTCTTCC TATGGTACGACGCGTTAACTAAAATCAGCGTCCAACTCGCCTCAGTACTTAGCTATTTAGACCCCGTTTTCGCAATTATA TTTGCATATATTTTCTTGGCACAAATGCCGTCCACTATGACAATAGTAGGAGGAATACTGATAATAGTAGGAGGAATAAT ATCGATTTTTGCCGAAACTTTCTGA
Upstream 100 bases:
>100_bases ATCATCTATGCTTGGCCTGAAGCTCGACTCAGTTTACAAGGTTTACCCCACTGGAAAGGACAGCGGGACTTACGTCGTCG CATTCACCAGGGCATGAGCA
Downstream 100 bases:
>100_bases GTAAAGAACGTTAGCTAACCATAGTAACTAAGGGGTGCCATCCCAGTGGGGGATAGGACTTGAACTTATACAGGCTTACG TCAGGGGAACCTCAGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKRLGIVEMIVTTVIWGSIPILALLSDLPSPVFVFFRVFLTSLFLFPIVKKIRPKLLLKITILLSGLSLALNWIFLFYSI RLVQVSEAILLYYTGPIFATIIMHFLGERINGVKLISILLAFGGIILILDPTEMSLNLGIYVALLSGLFYGILAVTSKLS TKLVSSKELVLYQTIIASALTFPFLFAFKFSFTLYTAIIVLVAALVNTLLALFLWYDALTKISVQLASVLSYLDPVFAII FAYIFLAQMPSTMTIVGGILIIVGGIISIFAETF
Sequences:
>Translated_274_residues MKRLGIVEMIVTTVIWGSIPILALLSDLPSPVFVFFRVFLTSLFLFPIVKKIRPKLLLKITILLSGLSLALNWIFLFYSI RLVQVSEAILLYYTGPIFATIIMHFLGERINGVKLISILLAFGGIILILDPTEMSLNLGIYVALLSGLFYGILAVTSKLS TKLVSSKELVLYQTIIASALTFPFLFAFKFSFTLYTAIIVLVAALVNTLLALFLWYDALTKISVQLASVLSYLDPVFAII FAYIFLAQMPSTMTIVGGILIIVGGIISIFAETF >Mature_274_residues MKRLGIVEMIVTTVIWGSIPILALLSDLPSPVFVFFRVFLTSLFLFPIVKKIRPKLLLKITILLSGLSLALNWIFLFYSI RLVQVSEAILLYYTGPIFATIIMHFLGERINGVKLISILLAFGGIILILDPTEMSLNLGIYVALLSGLFYGILAVTSKLS TKLVSSKELVLYQTIIASALTFPFLFAFKFSFTLYTAIIVLVAALVNTLLALFLWYDALTKISVQLASVLSYLDPVFAII FAYIFLAQMPSTMTIVGGILIIVGGIISIFAETF
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30297; Mature: 30297
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLGIVEMIVTTVIWGSIPILALLSDLPSPVFVFFRVFLTSLFLFPIVKKIRPKLLLKI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TILLSGLSLALNWIFLFYSIRLVQVSEAILLYYTGPIFATIIMHFLGERINGVKLISILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH AFGGIILILDPTEMSLNLGIYVALLSGLFYGILAVTSKLSTKLVSSKELVLYQTIIASAL HHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TFPFLFAFKFSFTLYTAIIVLVAALVNTLLALFLWYDALTKISVQLASVLSYLDPVFAII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAYIFLAQMPSTMTIVGGILIIVGGIISIFAETF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLGIVEMIVTTVIWGSIPILALLSDLPSPVFVFFRVFLTSLFLFPIVKKIRPKLLLKI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TILLSGLSLALNWIFLFYSIRLVQVSEAILLYYTGPIFATIIMHFLGERINGVKLISILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH AFGGIILILDPTEMSLNLGIYVALLSGLFYGILAVTSKLSTKLVSSKELVLYQTIIASAL HHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TFPFLFAFKFSFTLYTAIIVLVAALVNTLLALFLWYDALTKISVQLASVLSYLDPVFAII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAYIFLAQMPSTMTIVGGILIIVGGIISIFAETF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]