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The map label for this gene is 15922396

Identifier: 15922396

GI number: 15922396

Start: 2078325

End: 2079551

Strand: Direct

Name: 15922396

Synonym: ST2075

Alternate gene names: NA

Gene position: 2078325-2079551 (Clockwise)

Preceding gene: 15922395

Following gene: 15922399

Centisome position: 77.12

GC content: 33.09

Gene sequence:

>1227_bases
ATGAAATATAACATAGTCTTAAAATTTGAAGTAGAAGGAATAGTAGATAAACCGGATGTAATAGGGGCAATATTTGGACA
AACAGAAAACTTATTCGGAGAAGAATTTGATTTAAGAGAATTGCAAGACAAGGGAAGACTCGGAAGAATTTACGTTAACA
TAAATACTAGCAAAAACAAGACAGAAGGAGAGATAATAATACCATCTAACTTAGACCGAATAGAAACAGCATTAATAGCA
GCAATGGTAGAAAATGTAGATAAAGTAGGTCCATATAATGCAAGATTCAAGCTAGTGGAAATCCAAGATATAAGAGAAGA
AAAAATAAAGAAAATTATTGATAGAGCCAAAGAGATTCTAGGTACATGGACGAAAGAAAAGACATTAGATATTAAAGAGG
TAATTTACGAAATATCATCAGCCGTTAAGACAGGAGAGATAATAGAATATGGTCCAGACAGATTACCTGCAGGACCAGAT
GTAGATAAAGACCCAGAGTTAATAATCGTAGAAGGAAGAGCTGACGTCATTAATCTATTAAGATATGGATATAAGAATGT
AATAGCAATAGAAGGGGCTACTGGAAAAATACCTCAGACTATAATAGATCTTGCTAAGCAAAAGAAGACTGTTATAGCTT
TTCTTGACGGAGATCATGGTGGAGACTTAATACTCAAAGAACTTTTAGCAAATAATGTAAAAATTGATTATGTTGCTAGA
GCTCCTACGGGAAAAGAAGTAGAAGAATTAACTGGGAAGGAGATAAACAAATCATTAGCAAATATGATGACTGTAGCACA
ATATATGAAGAAACAGCAAGAAGCTCAACAGGCATTAAAAGAAGCATTAGCACCAGAAAGCCAACCCCCAATAGTTGTTT
CGAAACCAACTACTCCCGAGCAAATAAAAGAAATAACAATTAAGATACCTCAACATATTATCGAAGAGATTAAAAAGTTG
CCTGGAACATTAGAAGGAATAATGTTTGATGAAAATTGGAATCCCATAGAGAGGATTCAGGTCAGAGATATCGTACAAAG
GCTTGAGAATTTAACTGATAATCAAAATATTAGTTACATAATATTTGATGGTGTAATAACTCAACGTCTATTAGATTTAG
CTTCAGCAAAGAATATTAAACTTTTAGTAGGGGCAAGAATAGGAGGAATCTCAAAGAGACCTAAAAACGTAGAAATCTTA
ACTATGACAGACTTATTTACTTCTTAA

Upstream 100 bases:

>100_bases
TTAAATGAAATATTAGATCCAATTAGGAAAAAATTAGAATCAAAAACCGAATTCACACTTCTCGTAGAAGAACTTGAAAA
AGGAGTAACAAGGTGAAAAA

Downstream 100 bases:

>100_bases
AGAAACTCAAAATATCTACGCCACCAGTTTTAAGTGAACTTTCTTTTACTCCAAACCCTTCTAAAATTCTCATTGCAACT
GGTATTATTTGTTTATCTAT

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKYNIVLKFEVEGIVDKPDVIGAIFGQTENLFGEEFDLRELQDKGRLGRIYVNINTSKNKTEGEIIIPSNLDRIETALIA
AMVENVDKVGPYNARFKLVEIQDIREEKIKKIIDRAKEILGTWTKEKTLDIKEVIYEISSAVKTGEIIEYGPDRLPAGPD
VDKDPELIIVEGRADVINLLRYGYKNVIAIEGATGKIPQTIIDLAKQKKTVIAFLDGDHGGDLILKELLANNVKIDYVAR
APTGKEVEELTGKEINKSLANMMTVAQYMKKQQEAQQALKEALAPESQPPIVVSKPTTPEQIKEITIKIPQHIIEEIKKL
PGTLEGIMFDENWNPIERIQVRDIVQRLENLTDNQNISYIIFDGVITQRLLDLASAKNIKLLVGARIGGISKRPKNVEIL
TMTDLFTS

Sequences:

>Translated_408_residues
MKYNIVLKFEVEGIVDKPDVIGAIFGQTENLFGEEFDLRELQDKGRLGRIYVNINTSKNKTEGEIIIPSNLDRIETALIA
AMVENVDKVGPYNARFKLVEIQDIREEKIKKIIDRAKEILGTWTKEKTLDIKEVIYEISSAVKTGEIIEYGPDRLPAGPD
VDKDPELIIVEGRADVINLLRYGYKNVIAIEGATGKIPQTIIDLAKQKKTVIAFLDGDHGGDLILKELLANNVKIDYVAR
APTGKEVEELTGKEINKSLANMMTVAQYMKKQQEAQQALKEALAPESQPPIVVSKPTTPEQIKEITIKIPQHIIEEIKKL
PGTLEGIMFDENWNPIERIQVRDIVQRLENLTDNQNISYIIFDGVITQRLLDLASAKNIKLLVGARIGGISKRPKNVEIL
TMTDLFTS
>Mature_408_residues
MKYNIVLKFEVEGIVDKPDVIGAIFGQTENLFGEEFDLRELQDKGRLGRIYVNINTSKNKTEGEIIIPSNLDRIETALIA
AMVENVDKVGPYNARFKLVEIQDIREEKIKKIIDRAKEILGTWTKEKTLDIKEVIYEISSAVKTGEIIEYGPDRLPAGPD
VDKDPELIIVEGRADVINLLRYGYKNVIAIEGATGKIPQTIIDLAKQKKTVIAFLDGDHGGDLILKELLANNVKIDYVAR
APTGKEVEELTGKEINKSLANMMTVAQYMKKQQEAQQALKEALAPESQPPIVVSKPTTPEQIKEITIKIPQHIIEEIKKL
PGTLEGIMFDENWNPIERIQVRDIVQRLENLTDNQNISYIIFDGVITQRLLDLASAKNIKLLVGARIGGISKRPKNVEIL
TMTDLFTS

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2075_SULTO (Q96YV2)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_378065.1
- ProteinModelPortal:   Q96YV2
- GeneID:   1460140
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST2075
- NMPDR:   fig|273063.1.peg.2233
- HOGENOM:   HBG541216
- OMA:   GYRNVIA
- ProtClustDB:   PRK04031
- BioCyc:   STOK273063:ST2075-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 45778; Mature: 45778

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNIVLKFEVEGIVDKPDVIGAIFGQTENLFGEEFDLRELQDKGRLGRIYVNINTSKNK
CCEEEEEEEEECCCCCCCHHHHHHHCCCHHHCCCCCCHHHHHCCCCEEEEEEEEECCCCC
TEGEIIIPSNLDRIETALIAAMVENVDKVGPYNARFKLVEIQDIREEKIKKIIDRAKEIL
CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
GTWTKEKTLDIKEVIYEISSAVKTGEIIEYGPDRLPAGPDVDKDPELIIVEGRADVINLL
HCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH
RYGYKNVIAIEGATGKIPQTIIDLAKQKKTVIAFLDGDHGGDLILKELLANNVKIDYVAR
HHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEC
APTGKEVEELTGKEINKSLANMMTVAQYMKKQQEAQQALKEALAPESQPPIVVSKPTTPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHH
QIKEITIKIPQHIIEEIKKLPGTLEGIMFDENWNPIERIQVRDIVQRLENLTDNQNISYI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
IFDGVITQRLLDLASAKNIKLLVGARIGGISKRPKNVEILTMTDLFTS
EEHHHHHHHHHHHHCCCCEEEEEECEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKYNIVLKFEVEGIVDKPDVIGAIFGQTENLFGEEFDLRELQDKGRLGRIYVNINTSKNK
CCEEEEEEEEECCCCCCCHHHHHHHCCCHHHCCCCCCHHHHHCCCCEEEEEEEEECCCCC
TEGEIIIPSNLDRIETALIAAMVENVDKVGPYNARFKLVEIQDIREEKIKKIIDRAKEIL
CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
GTWTKEKTLDIKEVIYEISSAVKTGEIIEYGPDRLPAGPDVDKDPELIIVEGRADVINLL
HCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH
RYGYKNVIAIEGATGKIPQTIIDLAKQKKTVIAFLDGDHGGDLILKELLANNVKIDYVAR
HHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEC
APTGKEVEELTGKEINKSLANMMTVAQYMKKQQEAQQALKEALAPESQPPIVVSKPTTPE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHH
QIKEITIKIPQHIIEEIKKLPGTLEGIMFDENWNPIERIQVRDIVQRLENLTDNQNISYI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
IFDGVITQRLLDLASAKNIKLLVGARIGGISKRPKNVEILTMTDLFTS
EEHHHHHHHHHHHHCCCCEEEEEECEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11572479