| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922090
Identifier: 15922090
GI number: 15922090
Start: 1795074
End: 1795919
Strand: Reverse
Name: 15922090
Synonym: ST1778
Alternate gene names: NA
Gene position: 1795919-1795074 (Counterclockwise)
Preceding gene: 15922093
Following gene: 15922089
Centisome position: 66.64
GC content: 41.84
Gene sequence:
>846_bases ATGGCTAGGAGGGTTAAAGCGATCAGAGCTACTGTTTCGATGAAGATCGCCCTATCTGAACCCCTCCTAGCCCTTGTGAA TAACTACGTTAAGGCACTACGTTTCACCCTATTCTGGCTAAAGGAGAATGTTCCAAATCCAGAAGAGAAGGGTGTGTTAG GAAGAGTCCATGAGGAGTTATATGATAAGTTAAGAGGGGAATACAATCTACCATCAAAGGTTGCTGAGGACTGTTATAGG GATGCACTCTCAGTATACAAGGGTTGGTATAATAACCCAAGGAGGGGTAGGTTTCCTAGAGTGTATAGGCCGACTGTATG GTTAACACCAAAAGCAAGTTATAACGTGGACTTAGAAAGGATGACTGTTAGAATTGCTGGTGTCGGTGAGCTCCCAATCC TTGGTTATCCTAGAAACATTAAGGACTACGTGAACTGGAAGATGAAGGAAGCGAGACTCGTACTGAAGGATGGCAAGGCT TTCCTTAAAGTAGTTTTTGAGAAACCGTTGGAGAAAGTTGAACCTAGGGAAAGTGTTGCTGTTGATATTAACATGAATGA GATTGTTGTTGGTAAGGATGATACTCGTTATGTTAGGATTTTCACACGCCTTCATGAGGTTCATCATTGGAAGTCTTTAG CTGAAGCTCTGCAAATGAAGTACCCAAGGAGGTGGAGGGTGAATAAGAGGATTCTTGTAAGGATTAAGTACTTCTACTCT AAGGCTAAGCGAATCATGGAGGATTTTGCAAGGAAGGTTGGGAAGTGGGTTGTTGAGGTTGCAGAGGATTTTAATGCTAA TGTTATTAAGTTAGAGAACCTCAAGAATTTGATTAAACATGCTTAA
Upstream 100 bases:
>100_bases ATTAAAACCTATATAGGTTAAGGGGGCTGAAAGCCTCGCCAGCAGGGAATGGATAGCCCCCTTATAAAGTTTAAATATTA GCTCTTTTAATTTTCTCCTA
Downstream 100 bases:
>100_bases TAAATTACCATCTGAGTTTAGGGATAAACTGTATCTTATGCAATATCGTCGTGTTCAGTATTGGGTTGAGTGGCAGGCTA AGAAACACGGCTTGTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: IS Element ISTsi1 OrfB Transposase; IS Element ISTsi1 OrfB Trasposase
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MARRVKAIRATVSMKIALSEPLLALVNNYVKALRFTLFWLKENVPNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYR DALSVYKGWYNNPRRGRFPRVYRPTVWLTPKASYNVDLERMTVRIAGVGELPILGYPRNIKDYVNWKMKEARLVLKDGKA FLKVVFEKPLEKVEPRESVAVDINMNEIVVGKDDTRYVRIFTRLHEVHHWKSLAEALQMKYPRRWRVNKRILVRIKYFYS KAKRIMEDFARKVGKWVVEVAEDFNANVIKLENLKNLIKHA
Sequences:
>Translated_281_residues MARRVKAIRATVSMKIALSEPLLALVNNYVKALRFTLFWLKENVPNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYR DALSVYKGWYNNPRRGRFPRVYRPTVWLTPKASYNVDLERMTVRIAGVGELPILGYPRNIKDYVNWKMKEARLVLKDGKA FLKVVFEKPLEKVEPRESVAVDINMNEIVVGKDDTRYVRIFTRLHEVHHWKSLAEALQMKYPRRWRVNKRILVRIKYFYS KAKRIMEDFARKVGKWVVEVAEDFNANVIKLENLKNLIKHA >Mature_280_residues ARRVKAIRATVSMKIALSEPLLALVNNYVKALRFTLFWLKENVPNPEEKGVLGRVHEELYDKLRGEYNLPSKVAEDCYRD ALSVYKGWYNNPRRGRFPRVYRPTVWLTPKASYNVDLERMTVRIAGVGELPILGYPRNIKDYVNWKMKEARLVLKDGKAF LKVVFEKPLEKVEPRESVAVDINMNEIVVGKDDTRYVRIFTRLHEVHHWKSLAEALQMKYPRRWRVNKRILVRIKYFYSK AKRIMEDFARKVGKWVVEVAEDFNANVIKLENLKNLIKHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33161; Mature: 33030
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRVKAIRATVSMKIALSEPLLALVNNYVKALRFTLFWLKENVPNPEEKGVLGRVHEEL CCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHH YDKLRGEYNLPSKVAEDCYRDALSVYKGWYNNPRRGRFPRVYRPTVWLTPKASYNVDLER HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCHHH MTVRIAGVGELPILGYPRNIKDYVNWKMKEARLVLKDGKAFLKVVFEKPLEKVEPRESVA EEEEEECCCCCCCCCCCCCHHHHHCCHHHHHEEEHHCCHHHHHHHHHHHHHHCCCCCCEE VDINMNEIVVGKDDTRYVRIFTRLHEVHHWKSLAEALQMKYPRRWRVNKRILVRIKYFYS EEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHHHH KAKRIMEDFARKVGKWVVEVAEDFNANVIKLENLKNLIKHA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCC >Mature Secondary Structure ARRVKAIRATVSMKIALSEPLLALVNNYVKALRFTLFWLKENVPNPEEKGVLGRVHEEL CCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHH YDKLRGEYNLPSKVAEDCYRDALSVYKGWYNNPRRGRFPRVYRPTVWLTPKASYNVDLER HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCHHH MTVRIAGVGELPILGYPRNIKDYVNWKMKEARLVLKDGKAFLKVVFEKPLEKVEPRESVA EEEEEECCCCCCCCCCCCCHHHHHCCHHHHHEEEHHCCHHHHHHHHHHHHHHCCCCCCEE VDINMNEIVVGKDDTRYVRIFTRLHEVHHWKSLAEALQMKYPRRWRVNKRILVRIKYFYS EEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHHHHH KAKRIMEDFARKVGKWVVEVAEDFNANVIKLENLKNLIKHA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA