BacMap

Definition	Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession	NC_003106
Length	2,694,756

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The map label for this gene is nodI [H]

Identifier: 15921975

GI number: 15921975

Start: 1670656

End: 1671651

Strand: Direct

Name: nodI [H]

Synonym: ST1672

Alternate gene names: 15921975

Gene position: 1670656-1671651 (Clockwise)

Preceding gene: 15921973

Following gene: 15921976

Centisome position: 62.0

GC content: 32.83

Gene sequence:

>996_bases
ATGCTTATATTGAAGAATTTCAGTGACTCAATGCCATGTTCACTTTCTAAAAACTTTTTATATTTAGAGGTAATATGTAA
CTTAATGATTAGAATAGTAAATCTCTATAAAAAGTTTGGTGATTTCTTAGCTCTTAAAGGAGTTTCCTTTGATGTAAATA
ATGGAGAAGTTGTGGGCTTTGTTGGACTAAATGGAGCTGGTAAAACGACTACAATAAAAATTTCAGCTGGTGTAAATTTT
CCTACATCTGGTGATGTGGAGATTGATGGATATAGTATTACTAAAGATAAAAGGAAAGCAAGTAGAAACGTAGGTTGGGT
TCCAGAACTACCTAATTTTGAGCCGGATGTAAAAGCTTTGGATTACTTTGTCTATTTAGCTGGCTATTACGGTATTTCCT
CTCAAGAAGCTAAAAACCTGGGCAAAAAGCTTTTAGAAGAGGTAGGTCTCTCAGAATGGATGAACGTAAAGATTGGTAAG
TTTTCTCAAGGAATGAAGAAGAGGTTTGCCTTAGCTGTTTCATTAGCTGGTAATCCTAATAACTTTCTATTTGATGAAGT
TTTAAATGGCTTAGATCCTGCAGGGATGCAATTCTTTAAAGATTTAGTAATAAAGATGAAAAATGAAGGGAGAGCTATAC
TTTTCTCTTCTCATATTTTATCTGAGGTTGAAAACATAGCAGATAGAGTAGTGTTTATTCATAAAGGTAAGATAATTGGA
ATTAAAAAGATGGAAGACTTAAGGAAAATGGTTTCAACAAACATTGTAAAAGCAGTGGTAAACAATTACAACGAAGCACT
AAAGGTTGCTGAAAAATATGGTAAACCGGCTATAGTGAATGGACAAATAATTATATCTGATTTTAAGGGCGATATCTCTG
AACTATCGAGCGAACTAAAACCTTATGGTTTAATAGAAATTGGTTATGAAAGACAAAATCTTGAAAGTGTTTTCTTCCAA
TTAATTTCTGAGAGTGAAAAAAGTGAAAGCCGTTGA

Upstream 100 bases:

>100_bases
TAAGAAAATTAATATAGAAAGTCTTAAAAATGTTCTTCTAAAATCATAAAGTAGCGGATTTACCATATATTTTACATGTT
ATTATTAGATTTTAAGTTTA

Downstream 100 bases:

>100_bases
TGCAATTAATGAACTTTTTGCCAATTATCGGCTCATCATCCTTACTTTAATTATAGCGATAATTGGTGCTATAGTAGTGG
GTATTATTTCTTTACTTTTA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF
PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK
FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG
IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ
LISESEKSESR

Sequences:

>Translated_331_residues
MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF
PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK
FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG
IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ
LISESEKSESR
>Mature_331_residues
MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF
PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK
FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG
IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ
LISESEKSESR

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=307, Percent_Identity=27.3615635179153, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI27262624, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI27262626, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI45446740, Length=254, Percent_Identity=27.1653543307087, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI47078218, Length=254, Percent_Identity=27.1653543307087, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI27436953, Length=302, Percent_Identity=25.8278145695364, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI105990541, Length=197, Percent_Identity=28.4263959390863, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI6005701, Length=300, Percent_Identity=25.3333333333333, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI27477115, Length=309, Percent_Identity=25.2427184466019, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI150417984, Length=196, Percent_Identity=31.6326530612245, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI21536376, Length=217, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=25, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI27881501, Length=203, Percent_Identity=27.0935960591133, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI30795238, Length=203, Percent_Identity=27.0935960591133, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI46592915, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI46592956, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI46592898, Length=215, Percent_Identity=27.906976744186, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI46592978, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI46592971, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI46592964, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI42741659, Length=243, Percent_Identity=26.7489711934156, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=30, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=33.0188679245283, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=31.1926605504587, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=30.3738317757009, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=29.9065420560748, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI48994943, Length=257, Percent_Identity=23.7354085603113, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=30.4545454545455, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=30.4932735426009, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=27.3972602739726, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=29.3577981651376, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=31.25, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789593, Length=210, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=25.4237288135593, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=23.7885462555066, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787712, Length=235, Percent_Identity=26.3829787234043, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786703, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=26.8518518518519, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788210, Length=234, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789991, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081834, Length=221, Percent_Identity=26.2443438914027, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=28.921568627451, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=23.4309623430962, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788897, Length=228, Percent_Identity=25, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787758, Length=203, Percent_Identity=26.6009852216749, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790544, Length=230, Percent_Identity=22.6086956521739, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693107, Length=265, Percent_Identity=26.7924528301887, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787105, Length=243, Percent_Identity=23.8683127572016, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789751, Length=316, Percent_Identity=24.6835443037975, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082268, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789963, Length=232, Percent_Identity=23.7068965517241, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=24.7706422018349, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082064, Length=172, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=24.7474747474747, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=204, Percent_Identity=28.921568627451, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI115533608, Length=234, Percent_Identity=28.2051282051282, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71983523, Length=303, Percent_Identity=25.4125412541254, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71983510, Length=303, Percent_Identity=25.4125412541254, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71983516, Length=303, Percent_Identity=25.4125412541254, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=26.3829787234043, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI193211015, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71996809, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193211017, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=28.0701754385965, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569145, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666092, Length=227, Percent_Identity=31.7180616740088, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI221512771, Length=210, Percent_Identity=31.9047619047619, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28574150, Length=226, Percent_Identity=28.7610619469027, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI116007328, Length=226, Percent_Identity=28.7610619469027, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28573571, Length=215, Percent_Identity=30.6976744186047, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=26.3598326359833, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=30.1801801801802, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24648314, Length=238, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI28571209, Length=225, Percent_Identity=25.3333333333333, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI221500365, Length=230, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007184, Length=230, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28574744, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI19920532, Length=268, Percent_Identity=22.3880597014925, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580930, Length=268, Percent_Identity=22.3880597014925, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24643672, Length=197, Percent_Identity=23.8578680203046, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24662800, Length=211, Percent_Identity=27.0142180094787, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24581191, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581189, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581193, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581195, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 36848; Mature: 36848

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGF
CEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEEE
VGLNGAGKTTTIKISAGVNFPTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKAL
EEECCCCCEEEEEEEECCCCCCCCCEEECCEEECHHHHHHHCCCCCCCCCCCCCCCHHHH
DYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGKFSQGMKKRFALAVSLAGNPN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHEEEEEEECCCCC
NFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG
CEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEEECCEEEE
IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHCC
PYGLIEIGYERQNLESVFFQLISESEKSESR
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGF
CEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEEE
VGLNGAGKTTTIKISAGVNFPTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKAL
EEECCCCCEEEEEEEECCCCCCCCCEEECCEEECHHHHHHHCCCCCCCCCCCCCCCHHHH
DYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGKFSQGMKKRFALAVSLAGNPN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHEEEEEEECCCCC
NFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG
CEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEEECCEEEE
IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHCC
PYGLIEIGYERQNLESVFFQLISESEKSESR
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA