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The map label for this gene is oppD [C]

Identifier: 15921949

GI number: 15921949

Start: 1637765

End: 1638562

Strand: Reverse

Name: oppD [C]

Synonym: ST1646

Alternate gene names: 15921949

Gene position: 1638562-1637765 (Counterclockwise)

Preceding gene: 15921950

Following gene: 15921946

Centisome position: 60.81

GC content: 29.82

Gene sequence:

>798_bases
ATGTTTGGGATTCCCATGGTAATACAAAATATATCTGGGAAGTTCATTTCAAACATAGATTTAGAAATACATAAAATAAG
TTGCATAATTGGGAATTCTGGAAAGGATAAAGAGGAAATAGAAGAAATATTGCTAAAAAAGACAGATACAAGAAAGGTTA
GGATAATTCCTAGAGACAGAATTAACATTCCCTTAAAAGTCTCTGAGGTATACAACCTTTATGAGAAAAGATTTGGTAAA
AGATCTCAATTTATTCTTTCCCTTTTAGACTTAGATGAAAATGCTAAATTAGAAGAATTATCTGAGTTTGAAAAGTTTAA
AGTAGAACTAGCTCAGGTTGCATTTGGTGAAACAGAGCTTCTAATAGTAGAAAACTTCATGGAGACTTTTGAGGAACAAT
TGAAAAATTTAGCTATAAAGGAGATAATTAAAATATCAAATCTATTAGATTTTAAAATCTTATTTTTCTTTAGTGATCTC
GATTATATAAATGTATGTGATAGAATATATGTAATTTATGGCGGAAGACTATTAGAATATTCTACGAATAGTTCTGAGTT
TTACCATCCTTATACACTTGCGTTAAAGAACTCTACTCTGAATATCGGTAAAAAGGGAGAAAAGATAGAAGTTAATTACA
TAGGTGAGCCGGCTTTTAGAGGTTGTCCTTTTCATGATTATTGTACTTTTGCAAAAAAGGATAGAAAATTATTTAGAACA
TGCGTTACCTCATTCCCACCTAAAGTTATAATTAATAGGAATGAAGTGTATTGCTGGTGGTATTCATCTAGAGAATGA

Upstream 100 bases:

>100_bases
TTGGGAAAGGATGTATATATAGTGAAAATTGTAGGTTTTCAACTCTCAATTGTAAAAACATTACTCCAAAGCTAGTTGAT
CTAGGAGGTAGAAGGTTAAA

Downstream 100 bases:

>100_bases
CTTTAAATATTCTGCTAACTTCTTATAATTCGGGTTATTACACCTATTTACTAATCTGACTACCCCAAAATTACCTCTAA
TTTCTGGTTCAAAATTATCT

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFGIPMVIQNISGKFISNIDLEIHKISCIIGNSGKDKEEIEEILLKKTDTRKVRIIPRDRINIPLKVSEVYNLYEKRFGK
RSQFILSLLDLDENAKLEELSEFEKFKVELAQVAFGETELLIVENFMETFEEQLKNLAIKEIIKISNLLDFKILFFFSDL
DYINVCDRIYVIYGGRLLEYSTNSSEFYHPYTLALKNSTLNIGKKGEKIEVNYIGEPAFRGCPFHDYCTFAKKDRKLFRT
CVTSFPPKVIINRNEVYCWWYSSRE

Sequences:

>Translated_265_residues
MFGIPMVIQNISGKFISNIDLEIHKISCIIGNSGKDKEEIEEILLKKTDTRKVRIIPRDRINIPLKVSEVYNLYEKRFGK
RSQFILSLLDLDENAKLEELSEFEKFKVELAQVAFGETELLIVENFMETFEEQLKNLAIKEIIKISNLLDFKILFFFSDL
DYINVCDRIYVIYGGRLLEYSTNSSEFYHPYTLALKNSTLNIGKKGEKIEVNYIGEPAFRGCPFHDYCTFAKKDRKLFRT
CVTSFPPKVIINRNEVYCWWYSSRE
>Mature_265_residues
MFGIPMVIQNISGKFISNIDLEIHKISCIIGNSGKDKEEIEEILLKKTDTRKVRIIPRDRINIPLKVSEVYNLYEKRFGK
RSQFILSLLDLDENAKLEELSEFEKFKVELAQVAFGETELLIVENFMETFEEQLKNLAIKEIIKISNLLDFKILFFFSDL
DYINVCDRIYVIYGGRLLEYSTNSSEFYHPYTLALKNSTLNIGKKGEKIEVNYIGEPAFRGCPFHDYCTFAKKDRKLFRT
CVTSFPPKVIINRNEVYCWWYSSRE

Specific function: Part Of The Binding-Protein-Dependent Transport System For Oligopeptides. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG4608

COG function: function code E; ABC-type oligopeptide transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31085; Mature: 31085

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIPMVIQNISGKFISNIDLEIHKISCIIGNSGKDKEEIEEILLKKTDTRKVRIIPRDR
CCCCHHHHHHCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCC
INIPLKVSEVYNLYEKRFGKRSQFILSLLDLDENAKLEELSEFEKFKVELAQVAFGETEL
CCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
LIVENFMETFEEQLKNLAIKEIIKISNLLDFKILFFFSDLDYINVCDRIYVIYGGRLLEY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCEEEEEECCEEEEE
STNSSEFYHPYTLALKNSTLNIGKKGEKIEVNYIGEPAFRGCPFHDYCTFAKKDRKLFRT
ECCCCCCCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
CVTSFPPKVIINRNEVYCWWYSSRE
HHHCCCCEEEEECCEEEEEEECCCC
>Mature Secondary Structure
MFGIPMVIQNISGKFISNIDLEIHKISCIIGNSGKDKEEIEEILLKKTDTRKVRIIPRDR
CCCCHHHHHHCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCC
INIPLKVSEVYNLYEKRFGKRSQFILSLLDLDENAKLEELSEFEKFKVELAQVAFGETEL
CCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
LIVENFMETFEEQLKNLAIKEIIKISNLLDFKILFFFSDLDYINVCDRIYVIYGGRLLEY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCEEEEEECCEEEEE
STNSSEFYHPYTLALKNSTLNIGKKGEKIEVNYIGEPAFRGCPFHDYCTFAKKDRKLFRT
ECCCCCCCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
CVTSFPPKVIINRNEVYCWWYSSRE
HHHCCCCEEEEECCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA