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The map label for this gene is 15921764

Identifier: 15921764

GI number: 15921764

Start: 1473552

End: 1473857

Strand: Reverse

Name: 15921764

Synonym: ST1472

Alternate gene names: NA

Gene position: 1473857-1473552 (Counterclockwise)

Preceding gene: 15921765

Following gene: 15921762

Centisome position: 54.69

GC content: 34.31

Gene sequence:

>306_bases
ATGAAGTTCTGCCCTAAATGTGGAGGAGTAATGATACCGACTAAGAAGGACGGAAAAGAGATACTGAGATGTACTAAGTG
CGGTTACGAGATGGAACTTACAGCCAAGGATAAAAAAGAATATAGTGTAAAAGAACAAAAGGACAAAAATAGTAGAGTAC
TTACCACGTCATTAGTTAGTGATAAAGGAGAGAGAAAATTAGAGGAAGAGCAATTAGAACAAGAAAGAGAAGAATATTAT
AAAGAAGTTGGATTAGAACTATTAAGAGAAGAATTAAGTGAAGAAACAGAGTCAGATGAGGAATAA

Upstream 100 bases:

>100_bases
GAAGATCCAAGAATAAGAGTAATATGAATTTTTAATGATAAATCATTACCAAAAGCCTTATATATAGTATTATGACTTTA
CTCTTTTATATGGTGAAATA

Downstream 100 bases:

>100_bases
TCTTATCTTCTCAGCATATTCTGACATTTCCTTTTCATCGTTATATTTTGTCCTTTTAGACATGGAGTCAATATCTTTTC
CATCATTAAAATATCTTGGA

Product: DNA-directed RNA polymerase subunit M

Products: diphosphate; RNAn+1

Alternate protein names: Transcription Elongation Factor S-II Like-Protein; DNA-Directed RNA Polymerase M/15 KDa Subunit; Protein RpoM

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKFCPKCGGVMIPTKKDGKEILRCTKCGYEMELTAKDKKEYSVKEQKDKNSRVLTTSLVSDKGERKLEEEQLEQEREEYY
KEVGLELLREELSEETESDEE

Sequences:

>Translated_101_residues
MKFCPKCGGVMIPTKKDGKEILRCTKCGYEMELTAKDKKEYSVKEQKDKNSRVLTTSLVSDKGERKLEEEQLEQEREEYY
KEVGLELLREELSEETESDEE
>Mature_101_residues
MKFCPKCGGVMIPTKKDGKEILRCTKCGYEMELTAKDKKEYSVKEQKDKNSRVLTTSLVSDKGERKLEEEQLEQEREEYY
KEVGLELLREELSEETESDEE

Specific function: Unknown

COG id: COG1594

COG function: function code K; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 11832; Mature: 11832

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFCPKCGGVMIPTKKDGKEILRCTKCGYEMELTAKDKKEYSVKEQKDKNSRVLTTSLVS
CCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCEEEHHHHHH
DKGERKLEEEQLEQEREEYYKEVGLELLREELSEETESDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFCPKCGGVMIPTKKDGKEILRCTKCGYEMELTAKDKKEYSVKEQKDKNSRVLTTSLVS
CCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCEEEHHHHHH
DKGERKLEEEQLEQEREEYYKEVGLELLREELSEETESDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA