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The map label for this gene is gatC

Identifier: 15921548

GI number: 15921548

Start: 1279727

End: 1280020

Strand: Reverse

Name: gatC

Synonym: STS140

Alternate gene names: 15921548

Gene position: 1280020-1279727 (Counterclockwise)

Preceding gene: 15921549

Following gene: 15921546

Centisome position: 47.5

GC content: 30.61

Gene sequence:

>294_bases
GTGAAGATCGAAGTAAATAATGAACTTATTTCTAGATTACAGAATTTAGCCCTAGTAGAATTAAATGATAGAGAAAAGGA
AAGAATAAAACGAGATATAAAGAATATTCTCGATTTCTTTGATCAGATAAATAAACTAGACCTTTCTAATGTAGAACCTT
TATTTCATCCTATATCTACTGGTAAGCTTAGAAAAGATGAAATTATAAAACCATTGAGTAGAGATGAAGCATTAAGTAAT
GTGAAAAGAAAGGAGGATGGCTTTATAGTAGGACCTGCTACCTATGGGGAGTAA

Upstream 100 bases:

>100_bases
AAGGAACTTCACACTTATACTCTACCAGAAATTATTATAATAAACTTTAATGATGGCTTACCAGATTATTTAAAATGGAT
TAGTGAGAGCGTGAGAAGAA

Downstream 100 bases:

>100_bases
TATGATTATGAAACTGGTAGAAGACTTACTAAATAAGAACTTAGATATTGATGAATATGTTGAAAGAACATATGAAAGAA
TCGAGAAAATTGAGAAAAAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKIEVNNELISRLQNLALVELNDREKERIKRDIKNILDFFDQINKLDLSNVEPLFHPISTGKLRKDEIIKPLSRDEALSN
VKRKEDGFIVGPATYGE

Sequences:

>Translated_97_residues
MKIEVNNELISRLQNLALVELNDREKERIKRDIKNILDFFDQINKLDLSNVEPLFHPISTGKLRKDEIIKPLSRDEALSN
VKRKEDGFIVGPATYGE
>Mature_97_residues
MKIEVNNELISRLQNLALVELNDREKERIKRDIKNILDFFDQINKLDLSNVEPLFHPISTGKLRKDEIIKPLSRDEALSN
VKRKEDGFIVGPATYGE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SULTO (Q971U4)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_377217.1
- ProteinModelPortal:   Q971U4
- SMR:   Q971U4
- GeneID:   1459284
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS140
- NMPDR:   fig|273063.1.peg.1385
- HOGENOM:   HBG586403
- OMA:   PLFHPIS
- ProtClustDB:   PRK00034
- BioCyc:   STOK273063:STS140-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11247; Mature: 11247

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEVNNELISRLQNLALVELNDREKERIKRDIKNILDFFDQINKLDLSNVEPLFHPIST
CEEEECHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
GKLRKDEIIKPLSRDEALSNVKRKEDGFIVGPATYGE
CCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure
MKIEVNNELISRLQNLALVELNDREKERIKRDIKNILDFFDQINKLDLSNVEPLFHPIST
CEEEECHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
GKLRKDEIIKPLSRDEALSNVKRKEDGFIVGPATYGE
CCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479