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The map label for this gene is 15921545

Identifier: 15921545

GI number: 15921545

Start: 1277198

End: 1278274

Strand: Reverse

Name: 15921545

Synonym: ST1282

Alternate gene names: NA

Gene position: 1278274-1277198 (Counterclockwise)

Preceding gene: 15921546

Following gene: 15921543

Centisome position: 47.44

GC content: 33.98

Gene sequence:

>1077_bases
ATGGTAAGTAATCTTAGGATAGATACTTTAAGCTTGATAATGAAAGAACTAGAAAAAGAAAAATATCACATAGTTGGAAA
TCATAGTGTATATAAGAAATGTCATTGGACTCACGAAGCCTTAACTTCAGGGAGATACTGCTATAAAGGCAAGTTTTACG
GAATTGAAAGCCATAGATGTGTTCAAATGTCACCTACTGCTGCGTGGTGTTGGTTCAGATGCATCCATTGTTGGAGATTA
GAACCAGAGGATATAGGAATTGAATGGGATGAAACAAAATTACCAGTAGAAGATGATCCAGATATTATTGTGGAAAAAAG
TATAGAAGAACATAAAAGGGCAGTCTCTGGTTATTTTGGACGTGAGGGAGTAGATAAAAACAAAGTTAAAGAGGCTATAA
CACCTAAACATGTAGCTATAAGCCTTACAGGTGAACCCACATTATATGATAGGCTTGGAGAACTAATCAAAGAGTACCAT
AAAAGAGGGCTTACAACCTTTTTAGTAACTAGTGGAGTAAGGCCAGATATACTTGCAAGCTTAGAAGAAGAACCTACTCA
ATTATTTGTATCACTTCAAGCCCCTAATGAATTTAAACATAAACTAATAAATAGACCTATTGTTGCAAACTCATGGAATT
TAGTTATGAAAACATTAGAAATTCTTCCAAGCTTTAGTTCGCCCACAGTTATAAGAATGACTATGATAAAAGGATTCAAT
ATGAGCGATGAAGATGCAAGAGAATTTGCAAGACTCATGGAAATCGCACAACCAACATATATTGAAGTAAAAGCATACAT
GCATGTAGGACCTTCTACTTATAGACTTAGTAAAGATGCTATGCCTAGACATTTTGAAATTAAAGAATTTGCTAAAAAAT
TAGCTGAGTATACTGGTTATAAAATTCTATCTGAACATATACCTAGTAGAATAGTCTTATTAAGTAAATTAGATAAGCCT
ATACAGATAGGTAATGCTTGGACAGATAACTGGAATTGGGCAACTAAAGACATAGAAGATGATATAAATGGAGAATATAA
AGAAGCAGAACTAGGTTGTACGGAGGGAGAAACTTGA

Upstream 100 bases:

>100_bases
TTATGGCTATTTCAGCAAAAATAGAAAAAGTACTTAACCTTTATGATTTAACAGCACCTATAAGTTAAAGTTTTTAATCT
TACATTCAGTAGTTTAATAG

Downstream 100 bases:

>100_bases
AAAGATACACTATTTACATGTAAACTGTTTAAGTTATTAAATAGTGATAAGTTAGTAACACAAACAGAGATTTCAAAAGA
ATCTGGTTTATCACAGCAAA

Product: tRNA-modifying enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MVSNLRIDTLSLIMKELEKEKYHIVGNHSVYKKCHWTHEALTSGRYCYKGKFYGIESHRCVQMSPTAAWCWFRCIHCWRL
EPEDIGIEWDETKLPVEDDPDIIVEKSIEEHKRAVSGYFGREGVDKNKVKEAITPKHVAISLTGEPTLYDRLGELIKEYH
KRGLTTFLVTSGVRPDILASLEEEPTQLFVSLQAPNEFKHKLINRPIVANSWNLVMKTLEILPSFSSPTVIRMTMIKGFN
MSDEDAREFARLMEIAQPTYIEVKAYMHVGPSTYRLSKDAMPRHFEIKEFAKKLAEYTGYKILSEHIPSRIVLLSKLDKP
IQIGNAWTDNWNWATKDIEDDINGEYKEAELGCTEGET

Sequences:

>Translated_358_residues
MVSNLRIDTLSLIMKELEKEKYHIVGNHSVYKKCHWTHEALTSGRYCYKGKFYGIESHRCVQMSPTAAWCWFRCIHCWRL
EPEDIGIEWDETKLPVEDDPDIIVEKSIEEHKRAVSGYFGREGVDKNKVKEAITPKHVAISLTGEPTLYDRLGELIKEYH
KRGLTTFLVTSGVRPDILASLEEEPTQLFVSLQAPNEFKHKLINRPIVANSWNLVMKTLEILPSFSSPTVIRMTMIKGFN
MSDEDAREFARLMEIAQPTYIEVKAYMHVGPSTYRLSKDAMPRHFEIKEFAKKLAEYTGYKILSEHIPSRIVLLSKLDKP
IQIGNAWTDNWNWATKDIEDDINGEYKEAELGCTEGET
>Mature_358_residues
MVSNLRIDTLSLIMKELEKEKYHIVGNHSVYKKCHWTHEALTSGRYCYKGKFYGIESHRCVQMSPTAAWCWFRCIHCWRL
EPEDIGIEWDETKLPVEDDPDIIVEKSIEEHKRAVSGYFGREGVDKNKVKEAITPKHVAISLTGEPTLYDRLGELIKEYH
KRGLTTFLVTSGVRPDILASLEEEPTQLFVSLQAPNEFKHKLINRPIVANSWNLVMKTLEILPSFSSPTVIRMTMIKGFN
MSDEDAREFARLMEIAQPTYIEVKAYMHVGPSTYRLSKDAMPRHFEIKEFAKKLAEYTGYKILSEHIPSRIVLLSKLDKP
IQIGNAWTDNWNWATKDIEDDINGEYKEAELGCTEGET

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

Organism=Homo sapiens, GI50726981, Length=339, Percent_Identity=32.7433628318584, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI224282123, Length=296, Percent_Identity=30.7432432432432, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI224282125, Length=262, Percent_Identity=31.6793893129771, Blast_Score=140, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6325049, Length=323, Percent_Identity=32.1981424148607, Blast_Score=171, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197
- InterPro:   IPR013917 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08608 Wyosine_form [H]

EC number: NA

Molecular weight: Translated: 41331; Mature: 41331

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNLRIDTLSLIMKELEKEKYHIVGNHSVYKKCHWTHEALTSGRYCYKGKFYGIESHRC
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCEEEECEEECCCCCCE
VQMSPTAAWCWFRCIHCWRLEPEDIGIEWDETKLPVEDDPDIIVEKSIEEHKRAVSGYFG
EEECCHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCC
REGVDKNKVKEAITPKHVAISLTGEPTLYDRLGELIKEYHKRGLTTFLVTSGVRPDILAS
CCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
LEEEPTQLFVSLQAPNEFKHKLINRPIVANSWNLVMKTLEILPSFSSPTVIRMTMIKGFN
CCCCCEEEEEEEECCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC
MSDEDAREFARLMEIAQPTYIEVKAYMHVGPSTYRLSKDAMPRHFEIKEFAKKLAEYTGY
CCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCH
KILSEHIPSRIVLLSKLDKPIQIGNAWTDNWNWATKDIEDDINGEYKEAELGCTEGET
HHHHHHCCHHEEHHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCEEHHHCCCCCCCC
>Mature Secondary Structure
MVSNLRIDTLSLIMKELEKEKYHIVGNHSVYKKCHWTHEALTSGRYCYKGKFYGIESHRC
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCEEEECEEECCCCCCE
VQMSPTAAWCWFRCIHCWRLEPEDIGIEWDETKLPVEDDPDIIVEKSIEEHKRAVSGYFG
EEECCHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCC
REGVDKNKVKEAITPKHVAISLTGEPTLYDRLGELIKEYHKRGLTTFLVTSGVRPDILAS
CCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
LEEEPTQLFVSLQAPNEFKHKLINRPIVANSWNLVMKTLEILPSFSSPTVIRMTMIKGFN
CCCCCEEEEEEEECCHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC
MSDEDAREFARLMEIAQPTYIEVKAYMHVGPSTYRLSKDAMPRHFEIKEFAKKLAEYTGY
CCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHCH
KILSEHIPSRIVLLSKLDKPIQIGNAWTDNWNWATKDIEDDINGEYKEAELGCTEGET
HHHHHHCCHHEEHHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]