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The map label for this gene is yigC [C]

Identifier: 15921502

GI number: 15921502

Start: 1240245

End: 1241714

Strand: Reverse

Name: yigC [C]

Synonym: ST1239

Alternate gene names: 15921502

Gene position: 1241714-1240245 (Counterclockwise)

Preceding gene: 15921508

Following gene: 15921500

Centisome position: 46.08

GC content: 31.5

Gene sequence:

>1470_bases
ATGAATACTAATCTAGTGATTAATTTGGCATTCTCAGATTTGCGTGAGTATATAAACTATTTACGTTCAAAGAAAAAAAT
TATTGAAATCGAGGATGAAGTGGACCCTATACTTGAAATTGCAGAAATTTCTAGAAGAGCAACTTATAGTAAACTTCCTC
CATTACTTTTTAAAAATATTAAAGGTTATCCAAATTGGAGTGTAATAACTAATATATATTATTCGATTGAGGCTTTTTAT
GATTTATTTAATACTAATAAATTAGAAGAAATTACAGAATCTTTTCTAGATAAAATGTCAGGTTCTTTACCTGTATCATT
TTCTAATAAAATAAGAAATCTTTTTGATATTTTAAAACTAGGAAAAATTTTGCCTAAATCAAAAAAACCAGCTTTTAAAG
AAGATAATAACTTAAATTTTAATAAAATTCCTGCTCTTAAGACATGGCCAAAGGATGCTGGGAGGTATCTAACATTTTCT
ATATTAATAACCAAGGATCCTGACACTGGAGTTCATAATTTGAGTGTATATAGAATTCAACTTTTAAATGAAAGAGAGGC
CATAGTTCATTGGCAAGCACTAAAAAGGGGATCGTTAACAGCGTTTAAATATAAAGAAAAAGGAATTACCAAAATCCCCG
CAGTAATAGTAAATGGTGTTGATCCTATTCTGGCATTTGTTTCTGCCTCTCCAGTACCACCTGGATTAGATAAATATCTT
TTTGCTGGAATTTTAAGAAATGAAGGTGTAGAGGTTCATGAGTTAGATAATGGTATTCTTGTGCCCTCAACTGCTGAGAC
TGTTTTTGAAGGTTATGTAGATCTAAATGATTTAAGATTAGAAGGTCCATTTGGAGATCATTTAGGTTACTATACTCCAC
AAGATTATTATCCAGTATTTAAATTAGAAAGAACTTATTCAAGAGACAATCCTATATTTCATGCTACTTCTGTAGGAAAA
CCTCCATTAGAAGACGCATGGATAGGTAAAGCTGTAGAAAGACTTTTTCTCCCTTTCATTAGAATATTAATACCAGAAAT
TGTTGACATGAATCTCCCAGAATTTGGTCTATTTACTGGTATTGGTATATTCTCTATTAAGAAACATTATCCTGGTCAAG
CTAAAAAGACAATGATGAGTATATGGGGACTTGGTCAACTTAGCCTATTGAAAATGGTTATTATTGTTGATGCAGATGTA
AATGTTCATGATCTAAATGAAGTTTTATATGCTATTACTACTACCGTGAATCCTAGTAGGGATGTAGTAATTATCGATAA
TATTATCACTGATTCTTTGGATCATACAACTCCTTCTCCACCGCTGGGAAGCAAAATAGGTATTGACGCCACAAGAAAGT
TTAAAGAAGAACTAGGAAAAGAATGGCCAGAAGAAGTGTCAAGTGATGAAAATGTGGTAAAAAGAATAATGCCTTTGTGG
GAAAAAATCAAAACTCAATATCGTCCCTGA

Upstream 100 bases:

>100_bases
GATCCACAGTCTAAGCATTTTAGATAGCCTTGCATGTTTCCAACTATAGCTCACCACTAACGTAAAGCTCTTTTGTATAC
TAAATTATAAGCTTTATCTT

Downstream 100 bases:

>100_bases
AAGTCTTATCATCAATTTTATATACAATACTAATAGATTTAAGATATGGTAATTGAGTTTCAACTTCTATTTTTCCGTTG
GGAGGAATTTCTTTTTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNTNLVINLAFSDLREYINYLRSKKKIIEIEDEVDPILEIAEISRRATYSKLPPLLFKNIKGYPNWSVITNIYYSIEAFY
DLFNTNKLEEITESFLDKMSGSLPVSFSNKIRNLFDILKLGKILPKSKKPAFKEDNNLNFNKIPALKTWPKDAGRYLTFS
ILITKDPDTGVHNLSVYRIQLLNEREAIVHWQALKRGSLTAFKYKEKGITKIPAVIVNGVDPILAFVSASPVPPGLDKYL
FAGILRNEGVEVHELDNGILVPSTAETVFEGYVDLNDLRLEGPFGDHLGYYTPQDYYPVFKLERTYSRDNPIFHATSVGK
PPLEDAWIGKAVERLFLPFIRILIPEIVDMNLPEFGLFTGIGIFSIKKHYPGQAKKTMMSIWGLGQLSLLKMVIIVDADV
NVHDLNEVLYAITTTVNPSRDVVIIDNIITDSLDHTTPSPPLGSKIGIDATRKFKEELGKEWPEEVSSDENVVKRIMPLW
EKIKTQYRP

Sequences:

>Translated_489_residues
MNTNLVINLAFSDLREYINYLRSKKKIIEIEDEVDPILEIAEISRRATYSKLPPLLFKNIKGYPNWSVITNIYYSIEAFY
DLFNTNKLEEITESFLDKMSGSLPVSFSNKIRNLFDILKLGKILPKSKKPAFKEDNNLNFNKIPALKTWPKDAGRYLTFS
ILITKDPDTGVHNLSVYRIQLLNEREAIVHWQALKRGSLTAFKYKEKGITKIPAVIVNGVDPILAFVSASPVPPGLDKYL
FAGILRNEGVEVHELDNGILVPSTAETVFEGYVDLNDLRLEGPFGDHLGYYTPQDYYPVFKLERTYSRDNPIFHATSVGK
PPLEDAWIGKAVERLFLPFIRILIPEIVDMNLPEFGLFTGIGIFSIKKHYPGQAKKTMMSIWGLGQLSLLKMVIIVDADV
NVHDLNEVLYAITTTVNPSRDVVIIDNIITDSLDHTTPSPPLGSKIGIDATRKFKEELGKEWPEEVSSDENVVKRIMPLW
EKIKTQYRP
>Mature_489_residues
MNTNLVINLAFSDLREYINYLRSKKKIIEIEDEVDPILEIAEISRRATYSKLPPLLFKNIKGYPNWSVITNIYYSIEAFY
DLFNTNKLEEITESFLDKMSGSLPVSFSNKIRNLFDILKLGKILPKSKKPAFKEDNNLNFNKIPALKTWPKDAGRYLTFS
ILITKDPDTGVHNLSVYRIQLLNEREAIVHWQALKRGSLTAFKYKEKGITKIPAVIVNGVDPILAFVSASPVPPGLDKYL
FAGILRNEGVEVHELDNGILVPSTAETVFEGYVDLNDLRLEGPFGDHLGYYTPQDYYPVFKLERTYSRDNPIFHATSVGK
PPLEDAWIGKAVERLFLPFIRILIPEIVDMNLPEFGLFTGIGIFSIKKHYPGQAKKTMMSIWGLGQLSLLKMVIIVDADV
NVHDLNEVLYAITTTVNPSRDVVIIDNIITDSLDHTTPSPPLGSKIGIDATRKFKEELGKEWPEEVSSDENVVKRIMPLW
EKIKTQYRP

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=493, Percent_Identity=34.2799188640974, Blast_Score=294, Evalue=9e-81,
Organism=Saccharomyces cerevisiae, GI6320748, Length=460, Percent_Identity=24.5652173913043, Blast_Score=117, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55594; Mature: 55594

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNLVINLAFSDLREYINYLRSKKKIIEIEDEVDPILEIAEISRRATYSKLPPLLFKNI
CCCCEEEEEHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
KGYPNWSVITNIYYSIEAFYDLFNTNKLEEITESFLDKMSGSLPVSFSNKIRNLFDILKL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GKILPKSKKPAFKEDNNLNFNKIPALKTWPKDAGRYLTFSILITKDPDTGVHNLSVYRIQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEE
LLNEREAIVHWQALKRGSLTAFKYKEKGITKIPAVIVNGVDPILAFVSASPVPPGLDKYL
EECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
FAGILRNEGVEVHELDNGILVPSTAETVFEGYVDLNDLRLEGPFGDHLGYYTPQDYYPVF
HHHHHHCCCCEEEECCCCEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCE
KLERTYSRDNPIFHATSVGKPPLEDAWIGKAVERLFLPFIRILIPEIVDMNLPEFGLFTG
EEEHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
IGIFSIKKHYPGQAKKTMMSIWGLGQLSLLKMVIIVDADVNVHDLNEVLYAITTTVNPSR
CHHHEECCCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCHHHHHHHHHHHEECCCCCC
DVVIIDNIITDSLDHTTPSPPLGSKIGIDATRKFKEELGKEWPEEVSSDENVVKRIMPLW
CEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
EKIKTQYRP
HHHHHCCCC
>Mature Secondary Structure
MNTNLVINLAFSDLREYINYLRSKKKIIEIEDEVDPILEIAEISRRATYSKLPPLLFKNI
CCCCEEEEEHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
KGYPNWSVITNIYYSIEAFYDLFNTNKLEEITESFLDKMSGSLPVSFSNKIRNLFDILKL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GKILPKSKKPAFKEDNNLNFNKIPALKTWPKDAGRYLTFSILITKDPDTGVHNLSVYRIQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEE
LLNEREAIVHWQALKRGSLTAFKYKEKGITKIPAVIVNGVDPILAFVSASPVPPGLDKYL
EECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
FAGILRNEGVEVHELDNGILVPSTAETVFEGYVDLNDLRLEGPFGDHLGYYTPQDYYPVF
HHHHHHCCCCEEEECCCCEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCE
KLERTYSRDNPIFHATSVGKPPLEDAWIGKAVERLFLPFIRILIPEIVDMNLPEFGLFTG
EEEHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
IGIFSIKKHYPGQAKKTMMSIWGLGQLSLLKMVIIVDADVNVHDLNEVLYAITTTVNPSR
CHHHEECCCCCCHHHHHHHHHHCCCHHHHEEEEEEEECCCCHHHHHHHHHHHEECCCCCC
DVVIIDNIITDSLDHTTPSPPLGSKIGIDATRKFKEELGKEWPEEVSSDENVVKRIMPLW
CEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
EKIKTQYRP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]