| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yurY [H]
Identifier: 15921464
GI number: 15921464
Start: 1204483
End: 1205229
Strand: Reverse
Name: yurY [H]
Synonym: ST1201
Alternate gene names: 15921464
Gene position: 1205229-1204483 (Counterclockwise)
Preceding gene: 15921465
Following gene: 15921463
Centisome position: 44.72
GC content: 32.26
Gene sequence:
>747_bases GTGATATATATGACAACTTTAAAAATCGAAAATCTTCACGTAACAGTAGAAGGTAAAGAAATACTCAAAGGTGTCTCGCT AACTATAAACTCTGGAGAGATACATGTATTAATGGGACCTAACGGAAGTGGAAAGACCTCATTATCACTGGCTATAATGG GACATCCTAAATATAAAATCACTGAAGGCAAAATCTTACTAGATAATGAAGATATAACAAATCTTGAAACACATGAAAAA GTCAAAAAAGGATTATTCTTAGCATTTCAAAATCCCATAGAAATAAGCGGAGTAAAACTTTCTACATTACTAGTAGCGGA GTATAACAGAATTTACGGTTCATCACAATCCCCGCTACAAGTTATAAGTTATGTAAAAGAACTAAGTAAAACTGTAGGAG TAAGTGACTCATTATTAAACAGAGGTGTTTTTGAAGGATTTAGTGGTGGAGAAAAAAAGAGAACAGAAATTCTACAAATG TTATTAATGAAACCTAAAATAGCAATACTCGATGAGCCAGATTCAGGTGTTGATGTTGACGGTCTTAGAGCTATTGCTGA AGCTATAGTAAAACTTAGAAATGAGAATAATACTGGATACTTAATAATAACTCATTATAGAAGGATTCTTGATCACGTGA AAGCTGATAAAGTTCATGTACTTTATAGAGGTAAAATAGTAGCTTCTGGTGGGATGGAATTAGCTAAACTTATAGATGAA AAAGGGTATGAAGGAATATTGAAATAA
Upstream 100 bases:
>100_bases TTTACTTACTATGCTAGAAGAAGCATTAAATAACTCTTCATGTTCATTATTCCTTGAAGAAGCCCCTTGGATAGAGAGAA ATTTAAGCTCATAAGTAGAA
Downstream 100 bases:
>100_bases TTAGTAATTTTTCTAGAATTTAAAATTTTTAATTATTTATAGATAAGCTTATATTAGATCTTTAACAGAGTTAATGATAG GTAAACCAAAATGCCAGAAG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: VEG296 [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MIYMTTLKIENLHVTVEGKEILKGVSLTINSGEIHVLMGPNGSGKTSLSLAIMGHPKYKITEGKILLDNEDITNLETHEK VKKGLFLAFQNPIEISGVKLSTLLVAEYNRIYGSSQSPLQVISYVKELSKTVGVSDSLLNRGVFEGFSGGEKKRTEILQM LLMKPKIAILDEPDSGVDVDGLRAIAEAIVKLRNENNTGYLIITHYRRILDHVKADKVHVLYRGKIVASGGMELAKLIDE KGYEGILK
Sequences:
>Translated_248_residues MIYMTTLKIENLHVTVEGKEILKGVSLTINSGEIHVLMGPNGSGKTSLSLAIMGHPKYKITEGKILLDNEDITNLETHEK VKKGLFLAFQNPIEISGVKLSTLLVAEYNRIYGSSQSPLQVISYVKELSKTVGVSDSLLNRGVFEGFSGGEKKRTEILQM LLMKPKIAILDEPDSGVDVDGLRAIAEAIVKLRNENNTGYLIITHYRRILDHVKADKVHVLYRGKIVASGGMELAKLIDE KGYEGILK >Mature_248_residues MIYMTTLKIENLHVTVEGKEILKGVSLTINSGEIHVLMGPNGSGKTSLSLAIMGHPKYKITEGKILLDNEDITNLETHEK VKKGLFLAFQNPIEISGVKLSTLLVAEYNRIYGSSQSPLQVISYVKELSKTVGVSDSLLNRGVFEGFSGGEKKRTEILQM LLMKPKIAILDEPDSGVDVDGLRAIAEAIVKLRNENNTGYLIITHYRRILDHVKADKVHVLYRGKIVASGGMELAKLIDE KGYEGILK
Specific function: Unknown
COG id: COG0396
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955963, Length=239, Percent_Identity=26.3598326359833, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI171184400, Length=247, Percent_Identity=30.3643724696356, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI11967969, Length=232, Percent_Identity=28.0172413793103, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI73747915, Length=212, Percent_Identity=26.8867924528302, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI148612844, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9955966, Length=239, Percent_Identity=27.1966527196653, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45243524, Length=239, Percent_Identity=27.1966527196653, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI255708477, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI116734710, Length=228, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI9955968, Length=253, Percent_Identity=26.8774703557312, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI42490749, Length=241, Percent_Identity=26.5560165975104, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787972, Length=241, Percent_Identity=42.3236514522822, Blast_Score=207, Evalue=7e-55, Organism=Escherichia coli, GI1789864, Length=237, Percent_Identity=27.8481012658228, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788506, Length=244, Percent_Identity=27.0491803278689, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786654, Length=229, Percent_Identity=27.0742358078603, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787758, Length=219, Percent_Identity=25.5707762557078, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789672, Length=240, Percent_Identity=27.9166666666667, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789593, Length=234, Percent_Identity=31.6239316239316, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87082268, Length=214, Percent_Identity=29.9065420560748, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786698, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787759, Length=238, Percent_Identity=27.7310924369748, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=26.8518518518519, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789963, Length=214, Percent_Identity=26.6355140186916, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1786398, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=213, Percent_Identity=25.8215962441315, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=25.2173913043478, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787143, Length=232, Percent_Identity=29.3103448275862, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787792, Length=228, Percent_Identity=27.6315789473684, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=25.974025974026, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI48994883, Length=248, Percent_Identity=25.4032258064516, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1786563, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787112, Length=223, Percent_Identity=28.6995515695067, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI145693107, Length=244, Percent_Identity=25.4098360655738, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI48994997, Length=237, Percent_Identity=26.5822784810127, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.457399103139, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787547, Length=238, Percent_Identity=22.2689075630252, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17533971, Length=223, Percent_Identity=29.5964125560538, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI212646699, Length=217, Percent_Identity=28.110599078341, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115534520, Length=242, Percent_Identity=28.099173553719, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17541710, Length=234, Percent_Identity=29.4871794871795, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71992290, Length=238, Percent_Identity=28.9915966386555, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17565938, Length=231, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996809, Length=227, Percent_Identity=27.3127753303965, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193209708, Length=229, Percent_Identity=27.5109170305677, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193211015, Length=230, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=25.3333333333333, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25146777, Length=215, Percent_Identity=26.9767441860465, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17543740, Length=222, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567269, Length=232, Percent_Identity=27.1551724137931, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71992285, Length=230, Percent_Identity=27.3913043478261, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211017, Length=230, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115535101, Length=238, Percent_Identity=26.890756302521, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=201, Percent_Identity=27.8606965174129, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319856, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323217, Length=252, Percent_Identity=25.3968253968254, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357907, Length=217, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI161076684, Length=229, Percent_Identity=26.6375545851528, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581617, Length=229, Percent_Identity=26.6375545851528, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581615, Length=229, Percent_Identity=26.6375545851528, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076682, Length=229, Percent_Identity=26.6375545851528, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45552335, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552337, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552347, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552363, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552345, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552351, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552343, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552341, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552339, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552361, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24583969, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552359, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552355, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550972, Length=217, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552357, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552353, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552349, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI281363262, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653245, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI221512771, Length=231, Percent_Identity=28.1385281385281, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010230 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27345; Mature: 27345
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYMTTLKIENLHVTVEGKEILKGVSLTINSGEIHVLMGPNGSGKTSLSLAIMGHPKYKI CEEEEEEEEEEEEEEEEHHHHHCCEEEEEECCEEEEEECCCCCCCCEEEEEEEECCCEEE TEGKILLDNEDITNLETHEKVKKGLFLAFQNPIEISGVKLSTLLVAEYNRIYGSSQSPLQ ECCEEEECCCCCCCCHHHHHHHHCEEEEECCCEEECCEEEEEEEEEHHHHHCCCCCCHHH VISYVKELSKTVGVSDSLLNRGVFEGFSGGEKKRTEILQMLLMKPKIAILDEPDSGVDVD HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH GLRAIAEAIVKLRNENNTGYLIITHYRRILDHVKADKVHVLYRGKIVASGGMELAKLIDE HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHH KGYEGILK CCCCCCCC >Mature Secondary Structure MIYMTTLKIENLHVTVEGKEILKGVSLTINSGEIHVLMGPNGSGKTSLSLAIMGHPKYKI CEEEEEEEEEEEEEEEEHHHHHCCEEEEEECCEEEEEECCCCCCCCEEEEEEEECCCEEE TEGKILLDNEDITNLETHEKVKKGLFLAFQNPIEISGVKLSTLLVAEYNRIYGSSQSPLQ ECCEEEECCCCCCCCHHHHHHHHCEEEEECCCEEECCEEEEEEEEEHHHHHCCCCCCHHH VISYVKELSKTVGVSDSLLNRGVFEGFSGGEKKRTEILQMLLMKPKIAILDEPDSGVDVD HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH GLRAIAEAIVKLRNENNTGYLIITHYRRILDHVKADKVHVLYRGKIVASGGMELAKLIDE HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHH KGYEGILK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 9298659 [H]