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The map label for this gene is sufB [C]

Identifier: 15921463

GI number: 15921463

Start: 1202953

End: 1204392

Strand: Reverse

Name: sufB [C]

Synonym: ST1200

Alternate gene names: 15921463

Gene position: 1204392-1202953 (Counterclockwise)

Preceding gene: 15921464

Following gene: 15921462

Centisome position: 44.69

GC content: 34.03

Gene sequence:

>1440_bases
ATGCCAGAAGAGAAATTCTCGCTTGATATTAACGAGATCATAAATGCCACAATAGAGGCTAAAAACAATAATCTTAGTCA
AAGTGAATTTCATAAACGTGTAGTAGAGTCAGGGCTAAGCAAAGACGTAATCGTTGAAATTTCAAAACTCAAAAAAGAAC
CAGAATGGATGCTCAGATTAAGATTAAAAAGTTTAGAATTATTTGAAAAACTCCCAACTCCTAATTGGTTACCAGATTTC
CTTTCCGAATTAGATGTTTCAAAAATGGAAATTTACATAAAGCCTGATGTAGAAAGAACATCAAATTGGGATGAAGTACC
ACCAGAAATTAGAAAATATTATGAACAATTAGGAATTCCTCAGTCAGAACAACAATACTTAGGAGGTTTAGTTGCAACAT
TTGAATCAGAATCAATTTACTCTAACGTTAAACAAGAATTAGCTAAGAAAGGAGTAATAATGATGCCGCCAGAAGAAGCA
ATACAAAAATACCCAGACATAATAAAAGAATACTTCACAAAAATCTTCCCCGTTTCCGATCACAAATTTGCCGCACTTCA
TGGTGCCTTATGGAGTGGTGGAGTATTCGTATATGTACCAAAAGGTGTGAAAATAACCACACCAGTCGAAGGATTCTTCA
TAATAGGAAGTGAAATGGAAGGACAATTTGAGCACACCTTAATCATAGCAGATGAAGGTTCATATATACATTTCATTGAA
GGATGCTCAGCACCACAATTTAAGAAATTCTCATTCCACGATGGTATGGTAGAATTATATGCAAAGAAAAACGCTTATAT
TAAATTCACAACAGTACAAAACTGGAGCAAAAATGTAATTAACTTTAATAATAAGAGGGCATGGGCAGATGAAAATTCAA
CAGTGGAATGGGTAGAAGGTTCTTTAGGATCAAAATATAGTTTCGTTTATCCATCAACAATATTAAGAGGAAGAAATGCC
TCATCAACAAGTTTAGTAGTAACATTAGCCAGCGGTGAAGGAGAATGGAAGGACAGCGGATCAAAAATGATTCACGCAGC
ACCAAATACTAAGAGTAAAGTAATAAACAAGAACATAGGATTTAATGGCGGAGTAAACATATACAGAGGCTTAATAAGGG
TTAACAAAGGAGCTACTGGTGCAAAAGCATTTGTAAAGTGTGATTCACTAATGCTTGATGAGAAAACAAAAGCATATACA
TTCCCACATAACCAAGTCTTTGAAGAAGATGCAGATGTAGCTCATGAAGCCCATACTTTCAGAATGAATGAAGATCAATT
ATTCTATTTAATGAATAGAGGTATAGACGAAAAAGAATCAGTTTCAATGCTAGTCTTAGGATTTATTGATGAGATTATGA
AAGAACTACCATTTGAATATGCTACAATGCTGAATAAGGTTATTAAGTTAGAATTAGATAAACTAGGTGCAGTGGCATAA

Upstream 100 bases:

>100_bases
ATTGAAATAATTAGTAATTTTTCTAGAATTTAAAATTTTTAATTATTTATAGATAAGCTTATATTAGATCTTTAACAGAG
TTAATGATAGGTAAACCAAA

Downstream 100 bases:

>100_bases
ATGAGTATAATCGATTTTTCTTCTGTACAAAAATACATTTCTAACTTGGAAAATAAAGGAGAAAGACAAAAATTACTTTC
TTTAGCAGAATCATTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MPEEKFSLDINEIINATIEAKNNNLSQSEFHKRVVESGLSKDVIVEISKLKKEPEWMLRLRLKSLELFEKLPTPNWLPDF
LSELDVSKMEIYIKPDVERTSNWDEVPPEIRKYYEQLGIPQSEQQYLGGLVATFESESIYSNVKQELAKKGVIMMPPEEA
IQKYPDIIKEYFTKIFPVSDHKFAALHGALWSGGVFVYVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIE
GCSAPQFKKFSFHDGMVELYAKKNAYIKFTTVQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGRNA
SSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIGFNGGVNIYRGLIRVNKGATGAKAFVKCDSLMLDEKTKAYT
FPHNQVFEEDADVAHEAHTFRMNEDQLFYLMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA

Sequences:

>Translated_479_residues
MPEEKFSLDINEIINATIEAKNNNLSQSEFHKRVVESGLSKDVIVEISKLKKEPEWMLRLRLKSLELFEKLPTPNWLPDF
LSELDVSKMEIYIKPDVERTSNWDEVPPEIRKYYEQLGIPQSEQQYLGGLVATFESESIYSNVKQELAKKGVIMMPPEEA
IQKYPDIIKEYFTKIFPVSDHKFAALHGALWSGGVFVYVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIE
GCSAPQFKKFSFHDGMVELYAKKNAYIKFTTVQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGRNA
SSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIGFNGGVNIYRGLIRVNKGATGAKAFVKCDSLMLDEKTKAYT
FPHNQVFEEDADVAHEAHTFRMNEDQLFYLMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
>Mature_478_residues
PEEKFSLDINEIINATIEAKNNNLSQSEFHKRVVESGLSKDVIVEISKLKKEPEWMLRLRLKSLELFEKLPTPNWLPDFL
SELDVSKMEIYIKPDVERTSNWDEVPPEIRKYYEQLGIPQSEQQYLGGLVATFESESIYSNVKQELAKKGVIMMPPEEAI
QKYPDIIKEYFTKIFPVSDHKFAALHGALWSGGVFVYVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIEG
CSAPQFKKFSFHDGMVELYAKKNAYIKFTTVQNWSKNVINFNNKRAWADENSTVEWVEGSLGSKYSFVYPSTILRGRNAS
STSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIGFNGGVNIYRGLIRVNKGATGAKAFVKCDSLMLDEKTKAYTF
PHNQVFEEDADVAHEAHTFRMNEDQLFYLMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=457, Percent_Identity=36.7614879649891, Blast_Score=329, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54378; Mature: 54247

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEEKFSLDINEIINATIEAKNNNLSQSEFHKRVVESGLSKDVIVEISKLKKEPEWMLRL
CCCCHHCCCHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH
RLKSLELFEKLPTPNWLPDFLSELDVSKMEIYIKPDVERTSNWDEVPPEIRKYYEQLGIP
HHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
QSEQQYLGGLVATFESESIYSNVKQELAKKGVIMMPPEEAIQKYPDIIKEYFTKIFPVSD
CCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC
HKFAALHGALWSGGVFVYVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIE
CCHHHHHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEE
GCSAPQFKKFSFHDGMVELYAKKNAYIKFTTVQNWSKNVINFNNKRAWADENSTVEWVEG
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCCEECCCCCCEEEEEEC
SLGSKYSFVYPSTILRGRNASSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIG
CCCCEEEEECCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCC
FNGGVNIYRGLIRVNKGATGAKAFVKCDSLMLDEKTKAYTFPHNQVFEEDADVAHEAHTF
CCCCHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCHHHHHHHHHEE
RMNEDQLFYLMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEEKFSLDINEIINATIEAKNNNLSQSEFHKRVVESGLSKDVIVEISKLKKEPEWMLRL
CCCHHCCCHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH
RLKSLELFEKLPTPNWLPDFLSELDVSKMEIYIKPDVERTSNWDEVPPEIRKYYEQLGIP
HHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
QSEQQYLGGLVATFESESIYSNVKQELAKKGVIMMPPEEAIQKYPDIIKEYFTKIFPVSD
CCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCC
HKFAALHGALWSGGVFVYVPKGVKITTPVEGFFIIGSEMEGQFEHTLIIADEGSYIHFIE
CCHHHHHHHHHCCCEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEE
GCSAPQFKKFSFHDGMVELYAKKNAYIKFTTVQNWSKNVINFNNKRAWADENSTVEWVEG
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCCEECCCCCCEEEEEEC
SLGSKYSFVYPSTILRGRNASSTSLVVTLASGEGEWKDSGSKMIHAAPNTKSKVINKNIG
CCCCEEEEECCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCC
FNGGVNIYRGLIRVNKGATGAKAFVKCDSLMLDEKTKAYTFPHNQVFEEDADVAHEAHTF
CCCCHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHCHHHHHHHHHEE
RMNEDQLFYLMNRGIDEKESVSMLVLGFIDEIMKELPFEYATMLNKVIKLELDKLGAVA
ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA