| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yedF [C]
Identifier: 15921116
GI number: 15921116
Start: 857337
End: 857588
Strand: Direct
Name: yedF [C]
Synonym: STS099
Alternate gene names: 15921116
Gene position: 857337-857588 (Clockwise)
Preceding gene: 15921115
Following gene: 15921118
Centisome position: 31.82
GC content: 34.13
Gene sequence:
>252_bases ATGAGTGAAGATCTTAAATTACGAAACCCAGACCAAGTATTAGATGTAAGAGGTGAATCTTGTCCAGTCCCAGAAATGGA AGCAAGTAAAAAATTAAAGAAAATGAAAGTTGGACAATTACTTGAAGTTTTAACTGATCATCAACCAGCGGTAGACGTAA CATTACCCTCATTGGCTAAAAACTTAGGTTATCCATACGTAATAATTAAAGATGGTGAGGTTTATCGTGTTAGAATACTT AAGGTGAAATAG
Upstream 100 bases:
>100_bases CACATATTTAATCAAATTAATTTCAAATTAATTAATATAAAGGTTTATAAAGAGGTATTTTTTAAAAACGTGTTTTTCAT TAATTATTTTGGGGATTAAA
Downstream 100 bases:
>100_bases TTAATGCCACCTAGTATGGTATTACAACCCGTATATCAAGAAAGTTGGGCTTTAATTTATGGTCTTTTCGGTTTAAGCGG TTTTATTTTAGGTTGGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRIL KVK
Sequences:
>Translated_83_residues MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRIL KVK >Mature_82_residues SEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRILK VK
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9375; Mature: 9244
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAK CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH NLGYPYVIIKDGEVYRVRILKVK HCCCCEEEEECCCEEEEEEEEEC >Mature Secondary Structure SEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAK CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH NLGYPYVIIKDGEVYRVRILKVK HCCCCEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA