| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920757
Identifier: 15920757
GI number: 15920757
Start: 534882
End: 535427
Strand: Reverse
Name: 15920757
Synonym: ST0539
Alternate gene names: NA
Gene position: 535427-534882 (Counterclockwise)
Preceding gene: 15920759
Following gene: 15920756
Centisome position: 19.87
GC content: 29.12
Gene sequence:
>546_bases ATGAAAATAAAAAATGACTATGTAGAGAAACTTAACATTATTAGAGATAAAAGAGTAGCAGTTGTAGGTGCAGGTCCTAA TCTGGTATCTGTAAATGAAATTAGTGAAGATTTAATTATTTCAGCAGATGGAGCAACAAATTTCTTATATGAACATGGAA TCATTCCAGATATAATTGTAACTGATTTAGATGGAATTTCTGTGTTTCCAGAAGAATCAATTTACGTAGTTCATGCACAT GGTGATAATATTAGAAAATTGTACAAGGTAAATAATATGAAAATTGTAATAGGTTCGGCACAAGTTTTCCCTTTTGGAAA TATTCATTTATTCGGTGGATTTACTGATGGAGATAGAGCTGTAATTTTAGCAAAACTCTTCAAAGCTAAAGAAATTGTAC TTTATGGAATGGACTTTGATTCTGGTTATGTAGGAAAATATTCAAAACCTTATTATGAACAAAATTTACCAGCTAACTGG GTTAAAAGAAACAAACTAAAAATAGCTAAACAGATAATCGAACAAGTTTTAAGCAAAGATTTATAA
Upstream 100 bases:
>100_bases ACTTCAAGATCCTTTCTACTGGTTAACTTTTTATTCAAGAATAAGAGCGATTTTTGGTTATTCTTACAGAGATGATTACT ACTCAGCATTATTATTGAAC
Downstream 100 bases:
>100_bases TTTTTTAAGTAACAGATAGTTTGGGATGTCAATTCTCGGTTAATTCAAAAAAAGTTAGAATATTTGATACAACATTAAGA GATGGCGAGCAAGCTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKIKNDYVEKLNIIRDKRVAVVGAGPNLVSVNEISEDLIISADGATNFLYEHGIIPDIIVTDLDGISVFPEESIYVVHAH GDNIRKLYKVNNMKIVIGSAQVFPFGNIHLFGGFTDGDRAVILAKLFKAKEIVLYGMDFDSGYVGKYSKPYYEQNLPANW VKRNKLKIAKQIIEQVLSKDL
Sequences:
>Translated_181_residues MKIKNDYVEKLNIIRDKRVAVVGAGPNLVSVNEISEDLIISADGATNFLYEHGIIPDIIVTDLDGISVFPEESIYVVHAH GDNIRKLYKVNNMKIVIGSAQVFPFGNIHLFGGFTDGDRAVILAKLFKAKEIVLYGMDFDSGYVGKYSKPYYEQNLPANW VKRNKLKIAKQIIEQVLSKDL >Mature_181_residues MKIKNDYVEKLNIIRDKRVAVVGAGPNLVSVNEISEDLIISADGATNFLYEHGIIPDIIVTDLDGISVFPEESIYVVHAH GDNIRKLYKVNNMKIVIGSAQVFPFGNIHLFGGFTDGDRAVILAKLFKAKEIVLYGMDFDSGYVGKYSKPYYEQNLPANW VKRNKLKIAKQIIEQVLSKDL
Specific function: Unknown
COG id: COG1634
COG function: function code R; Uncharacterized Rossmann fold enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1634 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002826 - InterPro: IPR007371 [H]
Pfam domain/function: PF01973 DUF115 [H]
EC number: NA
Molecular weight: Translated: 20288; Mature: 20288
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKNDYVEKLNIIRDKRVAVVGAGPNLVSVNEISEDLIISADGATNFLYEHGIIPDIIV CCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCEEEECCCCCCCHHHCCCCCCEEE TDLDGISVFPEESIYVVHAHGDNIRKLYKVNNMKIVIGSAQVFPFGNIHLFGGFTDGDRA ECCCCCEECCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEECCCCEEEEECCCCCCHH VILAKLFKAKEIVLYGMDFDSGYVGKYSKPYYEQNLPANWVKRNKLKIAKQIIEQVLSKD HHEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure MKIKNDYVEKLNIIRDKRVAVVGAGPNLVSVNEISEDLIISADGATNFLYEHGIIPDIIV CCCCHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCEEEECCCCCCCHHHCCCCCCEEE TDLDGISVFPEESIYVVHAHGDNIRKLYKVNNMKIVIGSAQVFPFGNIHLFGGFTDGDRA ECCCCCEECCCCCEEEEEECCCCCEEEEEECCEEEEEECCEEECCCCEEEEECCCCCCHH VILAKLFKAKEIVLYGMDFDSGYVGKYSKPYYEQNLPANWVKRNKLKIAKQIIEQVLSKD HHEEHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]