| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920755
Identifier: 15920755
GI number: 15920755
Start: 533084
End: 533704
Strand: Reverse
Name: 15920755
Synonym: ST0537
Alternate gene names: NA
Gene position: 533704-533084 (Counterclockwise)
Preceding gene: 15920756
Following gene: 15920750
Centisome position: 19.81
GC content: 29.47
Gene sequence:
>621_bases ATGATAAAGTTTTTCTATCATTCTTCTTTTCTTCTAGATAATAAAATACTTTTAGATCCTCATGATGGAGGAAGTATAGG CTTACCCAGACCTGAAACTAAAGCTGATTTAATTCTCATAACTCATAATCATTACGACCATAATGCTTATGAAATAATTC CTCATAAAGATGTAAAAATTAAATATTATGGAGAATTTAATTATGCTTCGTATACTATTGAAGGATTAAAAGCATATCAT GATAAGGAAAAAGGAAAAAGAAGAGGAGAAACTGCTATTTACAGGATTGTAAACCCTAATGGAAAATTGATTGTTCATAT GGGCGATATTGGCCATATGCCAGATGATCAAATCCTTGAGAAGATAAAGAATCCAGATATATTGATGGTCCCAGTAGGAG GAGTTATAACAATAAATGCCTTGGAAGCAAAAGAAATAATAGATAAACTAAATCCTAAAATAACAATTCCAATGCATTAC TGGATTAAAGGACATTTTATGCCATTAGACCCTTTAGATAACTTCTTAGAAGTTATAAATAGAAAAACCATAGAAATAAG AGAAAAAGAAGTTGACGAAAATAGTATTGAAAAGGGATCTGTACTTATTTTTAAAGTCTAA
Upstream 100 bases:
>100_bases TATTAAATGAAATAAAGAAACTTGCTGAAAATGGTGAAAAGGTAAATGTTGATGTTGCTAAAGAGATAGCTATTAAAGTA AGTAGCAAAAAGATTAAAGT
Downstream 100 bases:
>100_bases CTTTTTCAACCTTTGCAACTGGCACTGTTTCTTTATCTATTTCTGTTTTAACCAGGCTTTCAATAGCTTTTCTGATAGCT TCTGATCTATTTAAACCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIKFFYHSSFLLDNKILLDPHDGGSIGLPRPETKADLILITHNHYDHNAYEIIPHKDVKIKYYGEFNYASYTIEGLKAYH DKEKGKRRGETAIYRIVNPNGKLIVHMGDIGHMPDDQILEKIKNPDILMVPVGGVITINALEAKEIIDKLNPKITIPMHY WIKGHFMPLDPLDNFLEVINRKTIEIREKEVDENSIEKGSVLIFKV
Sequences:
>Translated_206_residues MIKFFYHSSFLLDNKILLDPHDGGSIGLPRPETKADLILITHNHYDHNAYEIIPHKDVKIKYYGEFNYASYTIEGLKAYH DKEKGKRRGETAIYRIVNPNGKLIVHMGDIGHMPDDQILEKIKNPDILMVPVGGVITINALEAKEIIDKLNPKITIPMHY WIKGHFMPLDPLDNFLEVINRKTIEIREKEVDENSIEKGSVLIFKV >Mature_206_residues MIKFFYHSSFLLDNKILLDPHDGGSIGLPRPETKADLILITHNHYDHNAYEIIPHKDVKIKYYGEFNYASYTIEGLKAYH DKEKGKRRGETAIYRIVNPNGKLIVHMGDIGHMPDDQILEKIKNPDILMVPVGGVITINALEAKEIIDKLNPKITIPMHY WIKGHFMPLDPLDNFLEVINRKTIEIREKEVDENSIEKGSVLIFKV
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 23727; Mature: 23727
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFFYHSSFLLDNKILLDPHDGGSIGLPRPETKADLILITHNHYDHNAYEIIPHKDVKI CEEEEEECEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEE KYYGEFNYASYTIEGLKAYHDKEKGKRRGETAIYRIVNPNGKLIVHMGDIGHMPDDQILE EEEEEECCEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHH KIKNPDILMVPVGGVITINALEAKEIIDKLNPKITIPMHYWIKGHFMPLDPLDNFLEVIN HHCCCCEEEEECCCEEEEEECCHHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHHHHHHC RKTIEIREKEVDENSIEKGSVLIFKV CCEEEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure MIKFFYHSSFLLDNKILLDPHDGGSIGLPRPETKADLILITHNHYDHNAYEIIPHKDVKI CEEEEEECEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEE KYYGEFNYASYTIEGLKAYHDKEKGKRRGETAIYRIVNPNGKLIVHMGDIGHMPDDQILE EEEEEECCEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHH KIKNPDILMVPVGGVITINALEAKEIIDKLNPKITIPMHYWIKGHFMPLDPLDNFLEVIN HHCCCCEEEEECCCEEEEEECCHHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHHHHHHC RKTIEIREKEVDENSIEKGSVLIFKV CCEEEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA