| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920726
Identifier: 15920726
GI number: 15920726
Start: 507470
End: 508495
Strand: Direct
Name: 15920726
Synonym: ST0509
Alternate gene names: NA
Gene position: 507470-508495 (Clockwise)
Preceding gene: 15920723
Following gene: 15920727
Centisome position: 18.83
GC content: 32.55
Gene sequence:
>1026_bases ATGAGTAAAAGGTTAAATATGAATGCATTCGTCTTTGGACTAGGTGGTGGAGGAGACGTAGCATCTACTTACATAGCAAT GAAGTATCTCTATTTAAAGAACATCTCAAGTATAGTAGGAGCTGTAACATGGGAAAGATATGTAGAAGATCCTTTACCAG GCCCAATATGTAAAGAAGATATGAAAAATGCTGTTGTAATTAATGATGTAATAACTGAGGTCAATCAATCTTCATATGCA ATTAGGAATGGGTTAACTGTGATACCTCAATTAGTTCGTTATTTGAAAGCTATGAATATAGACAAGGGTTATTCTATCTG TATAAAATATGGTCCTAAAAGTATTGCAGAAGGAATTGCAGATTTAGCTTCAAGGTTAAATACTAATTTTATTATTGGAG TAGATGCAGGTGGTGACGTATTAGCAAAAGGTTGCGAAGAAACTCTTGGAAGTCCATTAATTGACTTCCTCATGTTAGCG TCTTTAGTTGAGCTAGAAAATATGGGTTTTAATGTTCTTTTAGCAACAATAGGTGCAGGTAGTGACGGAGAATTGGAACA AGAGTATATTCTAAAACGTATTTCTGAAATCGCCAGAAATGAGGGATTAATAGATATTAAAGGTATTGATAAAGACATGG AAAGAGACTTAGAAATAATATTATCAAATGTTAATACTGAAGCTTCTAGAATTCCTTTTGAAGCATTTAAGGGGCTTTAT GGTGAAATCCCAATAAGGAACGGAACTAGGAAAGTGAAAGTCTCTCCGATATCTTCAATTATGTTTTTTCTTGATCCTAA AAAAGTAGCTTATACATCACCGCTGTATAACATAGTTAAAAATAGTAGTTCGCTAGAGGATGCAAATAGAAAACTTAATG AAGTTGGTATTTACACAGAATATAATTTTGAACTAGATTTGTATGCTAAGTTTGGGTTAAATGCAAGGAATGTTGATTCA GAAAAAATATTACAAATAAGAAGTGAAGGAAGAAGGAAATTAGGTGGACTTAAGATTAATTGTTAA
Upstream 100 bases:
>100_bases TTTCTAAGCAGTCTCATGTTTAAAGATAAGAATCAGATAATACGTTAACATGAAGAGTATAATTTAACGTAACTTAGTAT TTAAATCTTGAAAGTACAAA
Downstream 100 bases:
>100_bases TTTTCTATATTATTTCTTAAAACATGTAAAATAATTTATAACCTTTGATGTAATTATATAAGCTGTGAATATACTTGATG AGTTAAAAAATACTTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSKRLNMNAFVFGLGGGGDVASTYIAMKYLYLKNISSIVGAVTWERYVEDPLPGPICKEDMKNAVVINDVITEVNQSSYA IRNGLTVIPQLVRYLKAMNIDKGYSICIKYGPKSIAEGIADLASRLNTNFIIGVDAGGDVLAKGCEETLGSPLIDFLMLA SLVELENMGFNVLLATIGAGSDGELEQEYILKRISEIARNEGLIDIKGIDKDMERDLEIILSNVNTEASRIPFEAFKGLY GEIPIRNGTRKVKVSPISSIMFFLDPKKVAYTSPLYNIVKNSSSLEDANRKLNEVGIYTEYNFELDLYAKFGLNARNVDS EKILQIRSEGRRKLGGLKINC
Sequences:
>Translated_341_residues MSKRLNMNAFVFGLGGGGDVASTYIAMKYLYLKNISSIVGAVTWERYVEDPLPGPICKEDMKNAVVINDVITEVNQSSYA IRNGLTVIPQLVRYLKAMNIDKGYSICIKYGPKSIAEGIADLASRLNTNFIIGVDAGGDVLAKGCEETLGSPLIDFLMLA SLVELENMGFNVLLATIGAGSDGELEQEYILKRISEIARNEGLIDIKGIDKDMERDLEIILSNVNTEASRIPFEAFKGLY GEIPIRNGTRKVKVSPISSIMFFLDPKKVAYTSPLYNIVKNSSSLEDANRKLNEVGIYTEYNFELDLYAKFGLNARNVDS EKILQIRSEGRRKLGGLKINC >Mature_340_residues SKRLNMNAFVFGLGGGGDVASTYIAMKYLYLKNISSIVGAVTWERYVEDPLPGPICKEDMKNAVVINDVITEVNQSSYAI RNGLTVIPQLVRYLKAMNIDKGYSICIKYGPKSIAEGIADLASRLNTNFIIGVDAGGDVLAKGCEETLGSPLIDFLMLAS LVELENMGFNVLLATIGAGSDGELEQEYILKRISEIARNEGLIDIKGIDKDMERDLEIILSNVNTEASRIPFEAFKGLYG EIPIRNGTRKVKVSPISSIMFFLDPKKVAYTSPLYNIVKNSSSLEDANRKLNEVGIYTEYNFELDLYAKFGLNARNVDSE KILQIRSEGRRKLGGLKINC
Specific function: Unknown
COG id: COG4034
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37638; Mature: 37507
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRLNMNAFVFGLGGGGDVASTYIAMKYLYLKNISSIVGAVTWERYVEDPLPGPICKED CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH MKNAVVINDVITEVNQSSYAIRNGLTVIPQLVRYLKAMNIDKGYSICIKYGPKSIAEGIA HCCEEEHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH DLASRLNTNFIIGVDAGGDVLAKGCEETLGSPLIDFLMLASLVELENMGFNVLLATIGAG HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC SDGELEQEYILKRISEIARNEGLIDIKGIDKDMERDLEIILSNVNTEASRIPFEAFKGLY CCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCHHHHCCCC GEIPIRNGTRKVKVSPISSIMFFLDPKKVAYTSPLYNIVKNSSSLEDANRKLNEVGIYTE CCCCCCCCCEEEEECHHHHHHEEECCCHHHHCCHHHHHHHCCCHHHHHHHHHHHEEEEEE YNFELDLYAKFGLNARNVDSEKILQIRSEGRRKLGGLKINC ECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure SKRLNMNAFVFGLGGGGDVASTYIAMKYLYLKNISSIVGAVTWERYVEDPLPGPICKED CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH MKNAVVINDVITEVNQSSYAIRNGLTVIPQLVRYLKAMNIDKGYSICIKYGPKSIAEGIA HCCEEEHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH DLASRLNTNFIIGVDAGGDVLAKGCEETLGSPLIDFLMLASLVELENMGFNVLLATIGAG HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC SDGELEQEYILKRISEIARNEGLIDIKGIDKDMERDLEIILSNVNTEASRIPFEAFKGLY CCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCHHHHCCCC GEIPIRNGTRKVKVSPISSIMFFLDPKKVAYTSPLYNIVKNSSSLEDANRKLNEVGIYTE CCCCCCCCCEEEEECHHHHHHEEECCCHHHHCCHHHHHHHCCCHHHHHHHHHHHEEEEEE YNFELDLYAKFGLNARNVDSEKILQIRSEGRRKLGGLKINC ECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA