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The map label for this gene is ybcL [C]

Identifier: 15920691

GI number: 15920691

Start: 477328

End: 477777

Strand: Reverse

Name: ybcL [C]

Synonym: ST0476

Alternate gene names: 15920691

Gene position: 477777-477328 (Counterclockwise)

Preceding gene: 15920692

Following gene: 15920690

Centisome position: 17.73

GC content: 32.89

Gene sequence:

>450_bases
ATGAATGTAAAGTCCTCAGCTTTTAAGAATGAAGATTTTATTCCAGTAAGGTACACTTGTGACGGAGAGGATATATCTCC
AGAGATAGAGTGGGATAAGGTTCAAAATGCAAAAAGCTATGCCTTAATAGTAGAAGATCCGGATGCACCTGGAGGTATTT
TTATACATTGGATTATATATAATATAAAAGGAACAAAATTACCAGAAAATATAAAAAAAGTTGAAAAAACTGAATTTGGT
ATTCAAGGTGAAAATGATTTTGGAAAAATAGGTTATGGAGGACCATGTCCTCCTAGAACTCATCCTCCTCATAGATATTA
CTTCTATGTATATGCTCTTGATACAGAACTGCCAGAACGATCAAGAATAACTGCAGATGAGCTTAAGAATTTAATGAAAG
GACATATAATTGATCAAGGAGTAATTATGGGTAAGTATAAAAGGAAGTAG

Upstream 100 bases:

>100_bases
TAATAGTGAGTAAGATAACTAAAAATGGACATGAGGAAAAAGAATATTATCCTCAAAGAAAAATCTAAAAGTTTTTATTC
CTTTCTAGGAATTTATAATT

Downstream 100 bases:

>100_bases
CCCTTTTAACTATCTTTTTAGAATAATATATGTAAGGGTAAATTTCATGTCACTTGAGGAGGAAATTCTTTGGGCTGAAA
AATATAGACCTAGAAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNVKSSAFKNEDFIPVRYTCDGEDISPEIEWDKVQNAKSYALIVEDPDAPGGIFIHWIIYNIKGTKLPENIKKVEKTEFG
IQGENDFGKIGYGGPCPPRTHPPHRYYFYVYALDTELPERSRITADELKNLMKGHIIDQGVIMGKYKRK

Sequences:

>Translated_149_residues
MNVKSSAFKNEDFIPVRYTCDGEDISPEIEWDKVQNAKSYALIVEDPDAPGGIFIHWIIYNIKGTKLPENIKKVEKTEFG
IQGENDFGKIGYGGPCPPRTHPPHRYYFYVYALDTELPERSRITADELKNLMKGHIIDQGVIMGKYKRK
>Mature_149_residues
MNVKSSAFKNEDFIPVRYTCDGEDISPEIEWDKVQNAKSYALIVEDPDAPGGIFIHWIIYNIKGTKLPENIKKVEKTEFG
IQGENDFGKIGYGGPCPPRTHPPHRYYFYVYALDTELPERSRITADELKNLMKGHIIDQGVIMGKYKRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=140, Percent_Identity=36.4285714285714, Blast_Score=88, Evalue=2e-19,
Organism=Escherichia coli, GI1786990, Length=138, Percent_Identity=36.231884057971, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17096; Mature: 17096

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKSSAFKNEDFIPVRYTCDGEDISPEIEWDKVQNAKSYALIVEDPDAPGGIFIHWIIY
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCEEEEEEEE
NIKGTKLPENIKKVEKTEFGIQGENDFGKIGYGGPCPPRTHPPHRYYFYVYALDTELPER
ECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC
SRITADELKNLMKGHIIDQGVIMGKYKRK
CCCCHHHHHHHHHCCCCCCCEEECEECCC
>Mature Secondary Structure
MNVKSSAFKNEDFIPVRYTCDGEDISPEIEWDKVQNAKSYALIVEDPDAPGGIFIHWIIY
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCEEEEEEEE
NIKGTKLPENIKKVEKTEFGIQGENDFGKIGYGGPCPPRTHPPHRYYFYVYALDTELPER
ECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC
SRITADELKNLMKGHIIDQGVIMGKYKRK
CCCCHHHHHHHHHCCCCCCCEEECEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]