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The map label for this gene is yfhQ [C]

Identifier: 15920666

GI number: 15920666

Start: 458399

End: 459082

Strand: Reverse

Name: yfhQ [C]

Synonym: ST0454

Alternate gene names: 15920666

Gene position: 459082-458399 (Counterclockwise)

Preceding gene: 15920667

Following gene: 15920665

Centisome position: 17.04

GC content: 32.16

Gene sequence:

>684_bases
ATGATAAGATTAGTGATAGTTGAACCAGAAGGGTCATATAATTTAGGATTCATTAGTAGATTAGCGAAAAATTTTCTAGT
AGATGAATTATATATAGTCAATCCGCATTGTGACTTAGAAGAAGCAAAAAAATTTTCTGCTAAAGGTTTAGAATACTTAG
AAAAAGCAAAAATAGTAAATAACTTTGATGAAGCAATAAAAGACGTTGAACTTAAAATTGCCACTTCTAGTATAGCTGAT
ATAAAAGGAGATATATTAAGAAAATCAATTAGACCTTGGGAATTACCTAGAATAATAGAAGGAAAAAAAGTAGCGCTGAT
ATTTGGTAGAGAGAGTGTAGGCCTTACTAGGGAAGAGATAGCCAAATCCGATTTACTCTTATTTATCCCTGGAAATCCGG
AATACCCTGTCCTTAATTTATCTCATGCTGTTGGTATAGTGCTTTACGAAATATGGAAAAGTCGAGGTGAAAATAAACCA
GTTATTAGCGGAGAGGCTATATCGCTTATTGATAAATACTCTAGAGATTTAGTAAACTTGATAAAAAGTAACGAAGGAGA
TGAAGCTATGTATATAGCATTAAAAAGAGCCCTAATTAAAGGAATCGGTGATGAGGAAGAGGCAAGAACGATTATAAGGT
TACTAAGAAAGCTATACATTAAATTAACGAGGAAAATAGAGTAG

Upstream 100 bases:

>100_bases
GACTATTTGCAAGAAATCATTAACAAATTAAAATATAGAATTTCATTAAGAAAAGAGAAAACTATAGGTTTTGAAACCCT
TTATGCTTTAGAGATATATA

Downstream 100 bases:

>100_bases
TGAACTTTTTATAAAAGTATGAAATAAGAAGATTAGCATGTCGTCAAAGACAGCAATCAAGGACAAGTGGAAATTGAAGA
AATGGTTTACAATAGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIRLVIVEPEGSYNLGFISRLAKNFLVDELYIVNPHCDLEEAKKFSAKGLEYLEKAKIVNNFDEAIKDVELKIATSSIAD
IKGDILRKSIRPWELPRIIEGKKVALIFGRESVGLTREEIAKSDLLLFIPGNPEYPVLNLSHAVGIVLYEIWKSRGENKP
VISGEAISLIDKYSRDLVNLIKSNEGDEAMYIALKRALIKGIGDEEEARTIIRLLRKLYIKLTRKIE

Sequences:

>Translated_227_residues
MIRLVIVEPEGSYNLGFISRLAKNFLVDELYIVNPHCDLEEAKKFSAKGLEYLEKAKIVNNFDEAIKDVELKIATSSIAD
IKGDILRKSIRPWELPRIIEGKKVALIFGRESVGLTREEIAKSDLLLFIPGNPEYPVLNLSHAVGIVLYEIWKSRGENKP
VISGEAISLIDKYSRDLVNLIKSNEGDEAMYIALKRALIKGIGDEEEARTIIRLLRKLYIKLTRKIE
>Mature_227_residues
MIRLVIVEPEGSYNLGFISRLAKNFLVDELYIVNPHCDLEEAKKFSAKGLEYLEKAKIVNNFDEAIKDVELKIATSSIAD
IKGDILRKSIRPWELPRIIEGKKVALIFGRESVGLTREEIAKSDLLLFIPGNPEYPVLNLSHAVGIVLYEIWKSRGENKP
VISGEAISLIDKYSRDLVNLIKSNEGDEAMYIALKRALIKGIGDEEEARTIIRLLRKLYIKLTRKIE

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=237, Percent_Identity=29.957805907173, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790865, Length=156, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 25735; Mature: 25735

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLVIVEPEGSYNLGFISRLAKNFLVDELYIVNPHCDLEEAKKFSAKGLEYLEKAKIVN
CEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NFDEAIKDVELKIATSSIADIKGDILRKSIRPWELPRIIEGKKVALIFGRESVGLTREEI
HHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHH
AKSDLLLFIPGNPEYPVLNLSHAVGIVLYEIWKSRGENKPVISGEAISLIDKYSRDLVNL
HHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
IKSNEGDEAMYIALKRALIKGIGDEEEARTIIRLLRKLYIKLTRKIE
HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRLVIVEPEGSYNLGFISRLAKNFLVDELYIVNPHCDLEEAKKFSAKGLEYLEKAKIVN
CEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NFDEAIKDVELKIATSSIADIKGDILRKSIRPWELPRIIEGKKVALIFGRESVGLTREEI
HHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHH
AKSDLLLFIPGNPEYPVLNLSHAVGIVLYEIWKSRGENKPVISGEAISLIDKYSRDLVNL
HHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
IKSNEGDEAMYIALKRALIKGIGDEEEARTIIRLLRKLYIKLTRKIE
HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]