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The map label for this gene is rps3Ae

Identifier: 15920665

GI number: 15920665

Start: 457780

End: 458361

Strand: Reverse

Name: rps3Ae

Synonym: ST0453

Alternate gene names: 15920665

Gene position: 458361-457780 (Counterclockwise)

Preceding gene: 15920666

Following gene: 15920664

Centisome position: 17.01

GC content: 32.82

Gene sequence:

>582_bases
ATGTCGTCAAAGACAGCAATCAAGGACAAGTGGAAATTGAAGAAATGGTTTACAATAGTTGCACCTAAAACTTTTGGAGA
AGTAGTTTTAGGTACAACACCCGCATTTGATGCTAACCAAGCTTTAAACAGAAAAGTAGAAACTACACTTTATGATCTAA
CTGGAGATTATAGTTTAGTGTATGTACACTTATACTTTAGAGTAATAGGGGTTGAAGGAGATAGATTATTAACAAGATTT
GCTGGTCATGAACTCTCAAGGGATTATATCAGGTCGTTAGTTAGAAGAAAAAGTTCAAAAATAGATGCTATTACTGATGT
AACAACTAAGGATGGTTATGTATTAAGAGTTAAAGGATTAGCATTAACCACTTATAGAGCACATAGGTCGCAAAAGACAG
AGATTAGAAAAATAATTTGGAATATTCTTTCAACTAGAGCATCTGAAACTACGTTTGATGAGTTTGTACAAGACATTGTA
TTTGGAAAACTTTCCAACGATATTTTCCAGCAAGCTAAAAAAATCTATCCCTTAAGAAAAGTAGAAGTAGAAAAAACCAA
ACTATTAAAAGCACCAGCTTGA

Upstream 100 bases:

>100_bases
GCAAGAACGATTATAAGGTTACTAAGAAAGCTATACATTAAATTAACGAGGAAAATAGAGTAGTGAACTTTTTATAAAAG
TATGAAATAAGAAGATTAGC

Downstream 100 bases:

>100_bases
ATATATTTTTATATTATAAAATTTTCTATGTTATATTAGGTTATATTATAGTAAAAGTCGTTTTTAAATATTTTATTTTC
TTTAAGAAAAGTCATGTTAC

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSSKTAIKDKWKLKKWFTIVAPKTFGEVVLGTTPAFDANQALNRKVETTLYDLTGDYSLVYVHLYFRVIGVEGDRLLTRF
AGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIV
FGKLSNDIFQQAKKIYPLRKVEVEKTKLLKAPA

Sequences:

>Translated_193_residues
MSSKTAIKDKWKLKKWFTIVAPKTFGEVVLGTTPAFDANQALNRKVETTLYDLTGDYSLVYVHLYFRVIGVEGDRLLTRF
AGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIV
FGKLSNDIFQQAKKIYPLRKVEVEKTKLLKAPA
>Mature_192_residues
SSKTAIKDKWKLKKWFTIVAPKTFGEVVLGTTPAFDANQALNRKVETTLYDLTGDYSLVYVHLYFRVIGVEGDRLLTRFA
GHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVF
GKLSNDIFQQAKKIYPLRKVEVEKTKLLKAPA

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=202, Percent_Identity=30.1980198019802, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17553700, Length=202, Percent_Identity=29.7029702970297, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323577, Length=200, Percent_Identity=33.5, Blast_Score=97, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323474, Length=207, Percent_Identity=32.8502415458937, Blast_Score=96, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17864162, Length=202, Percent_Identity=28.7128712871287, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24638499, Length=161, Percent_Identity=31.055900621118, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_SULTO (Q975F8)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376334.1
- GeneID:   1458390
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0453
- NMPDR:   fig|273063.1.peg.502
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- ProtClustDB:   PRK04057
- BioCyc:   STOK273063:ST0453-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 22180; Mature: 22049

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKTAIKDKWKLKKWFTIVAPKTFGEVVLGTTPAFDANQALNRKVETTLYDLTGDYSLV
CCCCCCHHHHHHHHHHEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHEECCCCHHHH
YVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGL
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEECE
ALTTYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRK
EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VEVEKTKLLKAPA
HHHHHHHHCCCCC
>Mature Secondary Structure 
SSKTAIKDKWKLKKWFTIVAPKTFGEVVLGTTPAFDANQALNRKVETTLYDLTGDYSLV
CCCCCHHHHHHHHHHEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHEECCCCHHHH
YVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGL
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEECE
ALTTYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRK
EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VEVEKTKLLKAPA
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479