| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yjjG [C]
Identifier: 15920647
GI number: 15920647
Start: 443143
End: 443868
Strand: Reverse
Name: yjjG [C]
Synonym: ST0436
Alternate gene names: 15920647
Gene position: 443868-443143 (Counterclockwise)
Preceding gene: 15920648
Following gene: 15920645
Centisome position: 16.47
GC content: 31.82
Gene sequence:
>726_bases ATGGAAGAGTTCAACATATTTAAGGATGTTAAGGCTATATTTTTTGACTTTGATAACACTTTAGTTTCTTTTGATAACCT TTCTAATCAAGCTTTACTTAAGGTGGCAGATGATATATTGGATTACATTAGAGAAAATTATCCTAATGTAAATGTAGATC GTGATGAGCTCTCAAAGACGCTTATAGAAATAGCGAAAAAACTAGATGAAGAAGGGGTTTATGACAGAAGACTATGGTGG GAGGAAGTATTAAAGAAATATAGTGTAAAGGCAGAGATGGAAGATTTATACGAGTGGACTCAAATATACTGGAGTATAGC TGGAAACAATACACCTTATGAAGATAGCTTGGATGCAATAGAATATTTAAAAAGAAAGGGATTCAAATTAGGTATAATAA CTAATAGTGACGGAGAATGGGGTAATAAAAAACAGAGAATCAACAGATTTCCATTAGTATCATATTTTGATATAATCACT ATAAGTGGTGAAAACAACATAAAACCTAAACCTAATGTGCAACCATTTATATTATCTTGTGAAAAACTCAATCTCTCAGT AAACCAGTGTCTTATGGTTGGAGATGATCCAATTAAAGATTGCTTAGCTGCCAAGAAGGCTGGTTTATATTCCATATTGG TTGATAGAGAAGGAAAAGTCAAATTCGCAGAACTTTATGCGGATTTTGTAATTCAAAATCTAAAACAGTTAGAAGAGATT TTTTAG
Upstream 100 bases:
>100_bases TCCAGATAGCCTATTATTAGATGTAATTATGAAAATAAGAGAGAGAAAAGGCCTGCCTAAGGAGTTGCCTAAGGTAGAGG ACTTCTTAGCGTGAAATTGC
Downstream 100 bases:
>100_bases TTGAATTAGATATTCATTTGTAATTTCTTTTTGTAAGTAATACAGAAATTTCTCATAAAGTTTGCTGCATATTTCATCTT CACAGTAATTTCTTAATTCC
Product: hypothetical protein
Products: (R)-2-hydroxyacid; halide
Alternate protein names: Hydrolase; 2-Haloalkanoic Acid Dehalogenase; HAD Family Hydrolase; HAD-Superfamily Hydrolase; Hydrolase HAD Superfamily; 2-Haloalkanoic Acid Dehalogenase-Like Hydrolase; Hydrolase Related 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase-Like Family Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Type II; Haloacid Dehalogenase Domain Protein Hydrolase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MEEFNIFKDVKAIFFDFDNTLVSFDNLSNQALLKVADDILDYIRENYPNVNVDRDELSKTLIEIAKKLDEEGVYDRRLWW EEVLKKYSVKAEMEDLYEWTQIYWSIAGNNTPYEDSLDAIEYLKRKGFKLGIITNSDGEWGNKKQRINRFPLVSYFDIIT ISGENNIKPKPNVQPFILSCEKLNLSVNQCLMVGDDPIKDCLAAKKAGLYSILVDREGKVKFAELYADFVIQNLKQLEEI F
Sequences:
>Translated_241_residues MEEFNIFKDVKAIFFDFDNTLVSFDNLSNQALLKVADDILDYIRENYPNVNVDRDELSKTLIEIAKKLDEEGVYDRRLWW EEVLKKYSVKAEMEDLYEWTQIYWSIAGNNTPYEDSLDAIEYLKRKGFKLGIITNSDGEWGNKKQRINRFPLVSYFDIIT ISGENNIKPKPNVQPFILSCEKLNLSVNQCLMVGDDPIKDCLAAKKAGLYSILVDREGKVKFAELYADFVIQNLKQLEEI F >Mature_241_residues MEEFNIFKDVKAIFFDFDNTLVSFDNLSNQALLKVADDILDYIRENYPNVNVDRDELSKTLIEIAKKLDEEGVYDRRLWW EEVLKKYSVKAEMEDLYEWTQIYWSIAGNNTPYEDSLDAIEYLKRKGFKLGIITNSDGEWGNKKQRINRFPLVSYFDIIT ISGENNIKPKPNVQPFILSCEKLNLSVNQCLMVGDDPIKDCLAAKKAGLYSILVDREGKVKFAELYADFVIQNLKQLEEI F
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.8.1.2
Molecular weight: Translated: 28084; Mature: 28084
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEFNIFKDVKAIFFDFDNTLVSFDNLSNQALLKVADDILDYIRENYPNVNVDRDELSKT CCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LIEIAKKLDEEGVYDRRLWWEEVLKKYSVKAEMEDLYEWTQIYWSIAGNNTPYEDSLDAI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHH EYLKRKGFKLGIITNSDGEWGNKKQRINRFPLVSYFDIITISGENNIKPKPNVQPFILSC HHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEH EKLNLSVNQCLMVGDDPIKDCLAAKKAGLYSILVDREGKVKFAELYADFVIQNLKQLEEI HHCCCCHHHEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH F C >Mature Secondary Structure MEEFNIFKDVKAIFFDFDNTLVSFDNLSNQALLKVADDILDYIRENYPNVNVDRDELSKT CCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LIEIAKKLDEEGVYDRRLWWEEVLKKYSVKAEMEDLYEWTQIYWSIAGNNTPYEDSLDAI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHH EYLKRKGFKLGIITNSDGEWGNKKQRINRFPLVSYFDIITISGENNIKPKPNVQPFILSC HHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEH EKLNLSVNQCLMVGDDPIKDCLAAKKAGLYSILVDREGKVKFAELYADFVIQNLKQLEEI HHCCCCHHHEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-2-haloacid; H2O
Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA