| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920645
Identifier: 15920645
GI number: 15920645
Start: 441220
End: 441810
Strand: Reverse
Name: 15920645
Synonym: ST0434
Alternate gene names: NA
Gene position: 441810-441220 (Counterclockwise)
Preceding gene: 15920647
Following gene: 15920644
Centisome position: 16.4
GC content: 24.7
Gene sequence:
>591_bases ATGGACTCAGTAAAAAATATCATAAATTTTGTTTTTCCATATGATGGAATTTATGAAGTTATTTTAGGATCAAATGGAGT TAAACCAAACTTAGCTCCAATAGGTATAATTAAGGATGGAAATACTTTGAAATCAAAAGTTTATAAAGACACACTTACTT TTTCTAATTTAATTAAATATCAAAAGTGTTCTCTAAATATAATAACTGATTCAAGAGTGTTCTTTGAAGCATTTTTTAAT GAGCTTAAAATAGAGGACTATATAGATAATATTCCTATAATTCCCGTAGGAGTAGTCTTTTTAGCTAATTGTTATTATGA AAAACTAGAAAATCCTACTTATTTCTTTTATGATTTGATTGATTATAAAAAATACGGAGAGTTTTACCATGCATTCAACA GAGGAAATTCTATGTTAATTGATCTGTTAATACACGTTTCTAGATTGGATATATATAGCAAAGAAGACATTGAAAAATAT TTACCTATAATAAAATATGAGATTGACATTATACGTAAAACTATGCCAAATGACATAAAAATTATTGAAAAAATTAAGGA ACTTATGTTACAGAAAGGGTTAAAAATTTAA
Upstream 100 bases:
>100_bases ATTCCTTTATTTTATCAACTATCAATCTTTCCTTTTTATCACCAGCTATTAATTCTCCGTATTTTGATAACTCTTTAACT CTTTCTCTTAATGTCATAAT
Downstream 100 bases:
>100_bases TTTCAAAAACCCCCCACATGGGCTTTACTGTTGCTTTAATACAAGGAGATGGAATTGGACCAGAAATAGTATCTAAATCT AAGAGAATATTAGCCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDSVKNIINFVFPYDGIYEVILGSNGVKPNLAPIGIIKDGNTLKSKVYKDTLTFSNLIKYQKCSLNIITDSRVFFEAFFN ELKIEDYIDNIPIIPVGVVFLANCYYEKLENPTYFFYDLIDYKKYGEFYHAFNRGNSMLIDLLIHVSRLDIYSKEDIEKY LPIIKYEIDIIRKTMPNDIKIIEKIKELMLQKGLKI
Sequences:
>Translated_196_residues MDSVKNIINFVFPYDGIYEVILGSNGVKPNLAPIGIIKDGNTLKSKVYKDTLTFSNLIKYQKCSLNIITDSRVFFEAFFN ELKIEDYIDNIPIIPVGVVFLANCYYEKLENPTYFFYDLIDYKKYGEFYHAFNRGNSMLIDLLIHVSRLDIYSKEDIEKY LPIIKYEIDIIRKTMPNDIKIIEKIKELMLQKGLKI >Mature_196_residues MDSVKNIINFVFPYDGIYEVILGSNGVKPNLAPIGIIKDGNTLKSKVYKDTLTFSNLIKYQKCSLNIITDSRVFFEAFFN ELKIEDYIDNIPIIPVGVVFLANCYYEKLENPTYFFYDLIDYKKYGEFYHAFNRGNSMLIDLLIHVSRLDIYSKEDIEKY LPIIKYEIDIIRKTMPNDIKIIEKIKELMLQKGLKI
Specific function: Unknown
COG id: COG2457
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22956; Mature: 22956
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVKNIINFVFPYDGIYEVILGSNGVKPNLAPIGIIKDGNTLKSKVYKDTLTFSNLIKY CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH QKCSLNIITDSRVFFEAFFNELKIEDYIDNIPIIPVGVVFLANCYYEKLENPTYFFYDLI HHCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH DYKKYGEFYHAFNRGNSMLIDLLIHVSRLDIYSKEDIEKYLPIIKYEIDIIRKTMPNDIK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH IIEKIKELMLQKGLKI HHHHHHHHHHHCCCCC >Mature Secondary Structure MDSVKNIINFVFPYDGIYEVILGSNGVKPNLAPIGIIKDGNTLKSKVYKDTLTFSNLIKY CCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH QKCSLNIITDSRVFFEAFFNELKIEDYIDNIPIIPVGVVFLANCYYEKLENPTYFFYDLI HHCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH DYKKYGEFYHAFNRGNSMLIDLLIHVSRLDIYSKEDIEKYLPIIKYEIDIIRKTMPNDIK HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH IIEKIKELMLQKGLKI HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA