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The map label for this gene is rpl19e [H]

Identifier: 15920624

GI number: 15920624

Start: 426833

End: 427288

Strand: Reverse

Name: rpl19e [H]

Synonym: ST0416

Alternate gene names: 15920624

Gene position: 427288-426833 (Counterclockwise)

Preceding gene: 15920625

Following gene: 15920623

Centisome position: 15.86

GC content: 32.02

Gene sequence:

>456_bases
ATGCCAGAGTTTGCTCTTCAAAGAAGACTTGCAGCAGAGCTTACTAATGTTGGAGAAAATAATGTGAAATTTAATACAAA
TTACTTAGATGATATAGCCTCAGCTATAACTAGAGATGAGATTAGAAAATTAATAAAAGAAGGAAAAATTATTATAGAGA
AAAAGAAAGGTATTAGTAGTGGGAGACTAAAAGAAAAGAAAGAAAAGAGGAGAAAAAGAGGAGAAAAAAGGAAGAGTGGA
AGTAGAAAAGGACCAGCTGGCGCAAGAAGAGGTAAGAAAGAGCAATGGGTTCTAAAGATTAGAAAAATAAGAACATACTT
GAAATGGCTCAGAGATAATGATGTTATAGATAAGAAAACATATAGATTAGCATATAGAAAAGCTAAAGGAAACTCTTTTA
GGAATCTCTCTGATGTAAAAAATTATCTTAAACAATTAGGCGTGAAGGTGGAGTGA

Upstream 100 bases:

>100_bases
ATAGTGGTCTTCTCATCAACGATAGGTTTAAAAAAGAAATTAGAATTAGTTGAAGAGGCTAAAAAAATGGGATTAAAAAT
AGCCAATGGGTGAGAGTTAG

Downstream 100 bases:

>100_bases
AATATGGCACATGGTCCTAATTATAGAGTAAAGTATAGGAGAAGAAGAGAAGGAAAAACTAATTATTATAAGAGATATAC
ATATGTTATAAACAACACCA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPEFALQRRLAAELTNVGENNVKFNTNYLDDIASAITRDEIRKLIKEGKIIIEKKKGISSGRLKEKKEKRRKRGEKRKSG
SRKGPAGARRGKKEQWVLKIRKIRTYLKWLRDNDVIDKKTYRLAYRKAKGNSFRNLSDVKNYLKQLGVKVE

Sequences:

>Translated_151_residues
MPEFALQRRLAAELTNVGENNVKFNTNYLDDIASAITRDEIRKLIKEGKIIIEKKKGISSGRLKEKKEKRRKRGEKRKSG
SRKGPAGARRGKKEQWVLKIRKIRTYLKWLRDNDVIDKKTYRLAYRKAKGNSFRNLSDVKNYLKQLGVKVE
>Mature_150_residues
PEFALQRRLAAELTNVGENNVKFNTNYLDDIASAITRDEIRKLIKEGKIIIEKKKGISSGRLKEKKEKRRKRGEKRKSGS
RKGPAGARRGKKEQWVLKIRKIRTYLKWLRDNDVIDKKTYRLAYRKAKGNSFRNLSDVKNYLKQLGVKVE

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=146, Percent_Identity=34.9315068493151, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508673, Length=130, Percent_Identity=35.3846153846154, Blast_Score=66, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6319559, Length=135, Percent_Identity=34.0740740740741, Blast_Score=64, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6319444, Length=135, Percent_Identity=34.0740740740741, Blast_Score=64, Evalue=9e-12,
Organism=Drosophila melanogaster, GI45552831, Length=143, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17136322, Length=143, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 17675; Mature: 17544

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFALQRRLAAELTNVGENNVKFNTNYLDDIASAITRDEIRKLIKEGKIIIEKKKGISS
CCCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
GRLKEKKEKRRKRGEKRKSGSRKGPAGARRGKKEQWVLKIRKIRTYLKWLRDNDVIDKKT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YRLAYRKAKGNSFRNLSDVKNYLKQLGVKVE
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PEFALQRRLAAELTNVGENNVKFNTNYLDDIASAITRDEIRKLIKEGKIIIEKKKGISS
CCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
GRLKEKKEKRRKRGEKRKSGSRKGPAGARRGKKEQWVLKIRKIRTYLKWLRDNDVIDKKT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YRLAYRKAKGNSFRNLSDVKNYLKQLGVKVE
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10381320 [H]