Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 15920561

GI number: 15920561

Start: 378098

End: 378736

Strand: Reverse

Name: ubiX [C]

Synonym: ST0360

Alternate gene names: 15920561

Gene position: 378736-378098 (Counterclockwise)

Preceding gene: 15920568

Following gene: 15920554

Centisome position: 14.05

GC content: 34.27

Gene sequence:

>639_bases
ATGGATAAGGAGACAAGAACAGAAAGTAGGGACAAGAAAAGGACAGTTGTTATAGGCATAAGTGGTGCTAGCGGAATAAT
TTATGGCATAAGAACAGTTAAGGCACTAAAAGAATTGGGTTACAAAACTGAAGTTATTTTAAGCAAAGAAGCAAAAAAAG
TAGCTAAAATAGAATGTGATATTGATTTGGACTCTTTCTTTAAAGCTCAAGACTCTATTATTTATGACGAAGATCAAATA
GAGGCTCCTCCTTCTAGTTCAAGTCATATAGTAGAAACAAGAGGAATGGTCATAGTACCATGTAGCATAAAAACCCTAGC
AGAAATTGCTAATGGAATCGCGTCTAATTTATTATCTAGAACAGCTCTTAATTTTTTAAGAGTCAGAAAAAGACTAATCT
TAGTAATACGAGAAACACCCCTAGGGACTATAGAATTACAAAATGCTCTAAAGGTTTCTAAAGCTGGAGGAATAATTATG
CCCGCATCCCCAGCTTTCTATCATTCACCACAGGGTGTTGATGATTTGATAAACTTTGTTGTAGGAAAAATTCTTGATTT
GTTAAAAATATCTAATTCCTTATATAAACATTGGCACACTGTTACAGCAAATCATATCCCTTGTGACCAAACCTCTTAG

Upstream 100 bases:

>100_bases
GTAGAATAATAAGAGATAATCCTATAGTAGTTAAAACATGCTGCAATAATAAGCCATGGGTTTTTTGTAGTAAACAATGT
TATAATAATTGGGTGAGGGA

Downstream 100 bases:

>100_bases
ATAATATATCTTTCATTTTACTATCATATTCTTCTTCTTTCTTTAACTCTCTCTCCATATCTTCTCCGTTTTCATTCCTC
TTTATGGCAAAAGCACATTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDKETRTESRDKKRTVVIGISGASGIIYGIRTVKALKELGYKTEVILSKEAKKVAKIECDIDLDSFFKAQDSIIYDEDQI
EAPPSSSSHIVETRGMVIVPCSIKTLAEIANGIASNLLSRTALNFLRVRKRLILVIRETPLGTIELQNALKVSKAGGIIM
PASPAFYHSPQGVDDLINFVVGKILDLLKISNSLYKHWHTVTANHIPCDQTS

Sequences:

>Translated_212_residues
MDKETRTESRDKKRTVVIGISGASGIIYGIRTVKALKELGYKTEVILSKEAKKVAKIECDIDLDSFFKAQDSIIYDEDQI
EAPPSSSSHIVETRGMVIVPCSIKTLAEIANGIASNLLSRTALNFLRVRKRLILVIRETPLGTIELQNALKVSKAGGIIM
PASPAFYHSPQGVDDLINFVVGKILDLLKISNSLYKHWHTVTANHIPCDQTS
>Mature_212_residues
MDKETRTESRDKKRTVVIGISGASGIIYGIRTVKALKELGYKTEVILSKEAKKVAKIECDIDLDSFFKAQDSIIYDEDQI
EAPPSSSSHIVETRGMVIVPCSIKTLAEIANGIASNLLSRTALNFLRVRKRLILVIRETPLGTIELQNALKVSKAGGIIM
PASPAFYHSPQGVDDLINFVVGKILDLLKISNSLYKHWHTVTANHIPCDQTS

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=38.6243386243386, Blast_Score=134, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6320746, Length=192, Percent_Identity=36.4583333333333, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 23346; Mature: 23346

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKETRTESRDKKRTVVIGISGASGIIYGIRTVKALKELGYKTEVILSKEAKKVAKIECD
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHEEEEEC
IDLDSFFKAQDSIIYDEDQIEAPPSSSSHIVETRGMVIVPCSIKTLAEIANGIASNLLSR
CCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHH
TALNFLRVRKRLILVIRETPLGTIELQNALKVSKAGGIIMPASPAFYHSPQGVDDLINFV
HHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH
VGKILDLLKISNSLYKHWHTVTANHIPCDQTS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDKETRTESRDKKRTVVIGISGASGIIYGIRTVKALKELGYKTEVILSKEAKKVAKIECD
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHEEEEEC
IDLDSFFKAQDSIIYDEDQIEAPPSSSSHIVETRGMVIVPCSIKTLAEIANGIASNLLSR
CCHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHH
TALNFLRVRKRLILVIRETPLGTIELQNALKVSKAGGIIMPASPAFYHSPQGVDDLINFV
HHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH
VGKILDLLKISNSLYKHWHTVTANHIPCDQTS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]