Click here to switch to the map view.

The map label for this gene is yciH [C]

Identifier: 15920552

GI number: 15920552

Start: 372604

End: 372906

Strand: Reverse

Name: yciH [C]

Synonym: ST0350

Alternate gene names: 15920552

Gene position: 372906-372604 (Counterclockwise)

Preceding gene: 15920554

Following gene: 15920550

Centisome position: 13.84

GC content: 31.35

Gene sequence:

>303_bases
ATGTCTGATAATCTGTGTGGAGGTCTACCACCCGAAATTTGTGAACAATTAAATAAAGAAGAACAATTCATAAAAATAAA
AGTAGAAAAAAGAAGATATGGAAAAGAAGTAACAATAATAGAAGGCCTTTCTGGTTCTGATGTAGAATTAAAGAAAATAG
CCTCAGAACTCAAATCAAAGCTTGCTGCAGGCGGAACAGTTAAAAATGGAAAAATAGAATTACAAGGAGATCACAGAGAA
AGAGTAAAAGAACTTCTTATGAAAATGGGTTACCCAGAATCTAACATCATAATAATAGAATAA

Upstream 100 bases:

>100_bases
CCTATATTTTGCCATAAAAGATAATAAAAACCTCATAATTAAAAACCTAACTGTTAACAGAAAAGTTGAAAAATCCCAAA
TACAATAAAAATCTTTGAGA

Downstream 100 bases:

>100_bases
AAAGAAAGAAAATAAAAAGAGTTAAACTAAGAAAAAAGTTAAAATTTTATTGATTTGGAATTTGAATTTTTAACTCTTGT
GTTAATTCCTTATATCTATT

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSDNLCGGLPPEICEQLNKEEQFIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSKLAAGGTVKNGKIELQGDHRE
RVKELLMKMGYPESNIIIIE

Sequences:

>Translated_100_residues
MSDNLCGGLPPEICEQLNKEEQFIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSKLAAGGTVKNGKIELQGDHRE
RVKELLMKMGYPESNIIIIE
>Mature_99_residues
SDNLCGGLPPEICEQLNKEEQFIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSKLAAGGTVKNGKIELQGDHRER
VKELLMKMGYPESNIIIIE

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUI1_SULTO (Q975S0)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376221.1
- ProteinModelPortal:   Q975S0
- SMR:   Q975S0
- GeneID:   1458274
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0350
- NMPDR:   fig|273063.1.peg.389
- HOGENOM:   HBG706849
- OMA:   PRIVNPL
- ProtClustDB:   PRK00939
- BioCyc:   STOK273063:ST0350-MONOMER
- HAMAP:   MF_00604
- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950
- PIRSF:   PIRSF037511
- TIGRFAMs:   TIGR01158

Pfam domain/function: PF01253 SUI1; SSF55159 TIF_SUI1

EC number: NA

Molecular weight: Translated: 11185; Mature: 11054

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLCGGLPPEICEQLNKEEQFIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSK
CCCCCCCCCCHHHHHHCCCCCEEEEEEEEHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
LAAGGTVKNGKIELQGDHRERVKELLMKMGYPESNIIIIE
HHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
SDNLCGGLPPEICEQLNKEEQFIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSK
CCCCCCCCCHHHHHHCCCCCEEEEEEEEHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH
LAAGGTVKNGKIELQGDHRERVKELLMKMGYPESNIIIIE
HHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479