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The map label for this gene is 15920530

Identifier: 15920530

GI number: 15920530

Start: 351092

End: 351589

Strand: Direct

Name: 15920530

Synonym: ST0331

Alternate gene names: NA

Gene position: 351092-351589 (Clockwise)

Preceding gene: 15920526

Following gene: 15920531

Centisome position: 13.03

GC content: 31.33

Gene sequence:

>498_bases
ATGCAAAGCTCAGCACAAAAATACTGTGAAATGTGTGGTGCTCCTATAAAAGGAAAAGGTATTACAGTTGCCTATGAAGG
GAGTATTATTACTGTATGCCTATCTTGTTATAATAAAATTAGAAAATCTGCAAAAATAGTTAATGAAAAAGAAATAAAGA
AAAACGAAGAAAAGAAAAAAATAAAAGCATCGACACCAAAATTATCTACTGAAGTGGAATTAGAAGTAGTAGATGATTAT
TACAAGTTAATTAAAGAAGCTAGAGAAAGACATGGTCTTTCACAACAACAGTTAGCTCAACAATTAAAAGTTTCAGAAAA
TGTAATAAAGAGATTTGAAAGTGGTAAATTAAAACCAACAATACAACAAGCAAAACAATTAGAAAAAATCTTAGGAATCA
AACTGCTAGTACCAGTTGAGTCAGAAGAAGAAGGAGAGGAAAAAGATTTTGAGCTAACGCTGGGTGATGTAGCAAACATC
AGAGAGGGAAAGAAGTGA

Upstream 100 bases:

>100_bases
GGCTCTGTAACTGTCTAATTCGTCAGACAATTTACCCCAATAATATCTTTGTATAATTAAACCTAAAAACGTTTAAGAGT
AGTAATAAAGAATATATAGT

Downstream 100 bases:

>100_bases
AAGCAATACTCTTTACAGCAGAGGAATACAAAGACGAAGCCTTATCATTAGCAGAAACAGCATTTTATGAAATAACAAAA
ATCTACAAAATACCAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MQSSAQKYCEMCGAPIKGKGITVAYEGSIITVCLSCYNKIRKSAKIVNEKEIKKNEEKKKIKASTPKLSTEVELEVVDDY
YKLIKEARERHGLSQQQLAQQLKVSENVIKRFESGKLKPTIQQAKQLEKILGIKLLVPVESEEEGEEKDFELTLGDVANI
REGKK

Sequences:

>Translated_165_residues
MQSSAQKYCEMCGAPIKGKGITVAYEGSIITVCLSCYNKIRKSAKIVNEKEIKKNEEKKKIKASTPKLSTEVELEVVDDY
YKLIKEARERHGLSQQQLAQQLKVSENVIKRFESGKLKPTIQQAKQLEKILGIKLLVPVESEEEGEEKDFELTLGDVANI
REGKK
>Mature_165_residues
MQSSAQKYCEMCGAPIKGKGITVAYEGSIITVCLSCYNKIRKSAKIVNEKEIKKNEEKKKIKASTPKLSTEVELEVVDDY
YKLIKEARERHGLSQQQLAQQLKVSENVIKRFESGKLKPTIQQAKQLEKILGIKLLVPVESEEEGEEKDFELTLGDVANI
REGKK

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 18629; Mature: 18629

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSAQKYCEMCGAPIKGKGITVAYEGSIITVCLSCYNKIRKSAKIVNEKEIKKNEEKKK
CCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKASTPKLSTEVELEVVDDYYKLIKEARERHGLSQQQLAQQLKVSENVIKRFESGKLKPT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
IQQAKQLEKILGIKLLVPVESEEEGEEKDFELTLGDVANIREGKK
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEHHHHHHHCCCCC
>Mature Secondary Structure
MQSSAQKYCEMCGAPIKGKGITVAYEGSIITVCLSCYNKIRKSAKIVNEKEIKKNEEKKK
CCCHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKASTPKLSTEVELEVVDDYYKLIKEARERHGLSQQQLAQQLKVSENVIKRFESGKLKPT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
IQQAKQLEKILGIKLLVPVESEEEGEEKDFELTLGDVANIREGKK
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]