Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15920267

Identifier: 15920267

GI number: 15920267

Start: 110899

End: 111234

Strand: Direct

Name: 15920267

Synonym: ST0089

Alternate gene names: NA

Gene position: 110899-111234 (Clockwise)

Preceding gene: 15920263

Following gene: 15920268

Centisome position: 4.12

GC content: 33.63

Gene sequence:

>336_bases
GTGATGGCAAAAGTATTATTTCTAATAATGTCTGGGGACGATAAATTCGATTTAGCTATGAGAATGGCATACAATTCAAT
TAAGAATAAGAGGTATGAAGATGTTAAAGTCATATTTTTCGGCCCAAGTCAAAAGAAATTAACTCAAATAGACGGAGAAA
TTAAGAACATGTTCCAAGAAATGCTAAATAGCAAGGCTATAGACTCAGCTTGTATTGGTGTAGCTCAGGCAATGAACATA
AAACCACATTTAGAAAATATGGGAATAAGTCTAATGCCTGCTGGAGAAAGAGTATCATACTACGTTAACCAGGGTTATGA
AGTTATAACATTCTAA

Upstream 100 bases:

>100_bases
ACATAACTTTACTTTTGGAAATTTACTATAAATTAGTAAGTTTAAAGCTATTTAATGTTTATCAAAAATGAAAATATAAG
CTAATTTAATATAAGCAATT

Downstream 100 bases:

>100_bases
TTTTTATTAATTAATTTATTTTTTATAGTTTTGATATTCTTCCTCTTTTTTCCTACTCTTATCATTAACTCGTGAATTTT
GGGAAAACATGACAAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MMAKVLFLIMSGDDKFDLAMRMAYNSIKNKRYEDVKVIFFGPSQKKLTQIDGEIKNMFQEMLNSKAIDSACIGVAQAMNI
KPHLENMGISLMPAGERVSYYVNQGYEVITF

Sequences:

>Translated_111_residues
MMAKVLFLIMSGDDKFDLAMRMAYNSIKNKRYEDVKVIFFGPSQKKLTQIDGEIKNMFQEMLNSKAIDSACIGVAQAMNI
KPHLENMGISLMPAGERVSYYVNQGYEVITF
>Mature_111_residues
MMAKVLFLIMSGDDKFDLAMRMAYNSIKNKRYEDVKVIFFGPSQKKLTQIDGEIKNMFQEMLNSKAIDSACIGVAQAMNI
KPHLENMGISLMPAGERVSYYVNQGYEVITF

Specific function: Unknown

COG id: COG3370

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12613; Mature: 12613

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
9.0 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAKVLFLIMSGDDKFDLAMRMAYNSIKNKRYEDVKVIFFGPSQKKLTQIDGEIKNMFQE
CCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHH
MLNSKAIDSACIGVAQAMNIKPHLENMGISLMPAGERVSYYVNQGYEVITF
HHCCCCHHHHHHHHHHHCCCCCCHHHCCEEEEECCCCEEEEECCCEEEEEC
>Mature Secondary Structure
MMAKVLFLIMSGDDKFDLAMRMAYNSIKNKRYEDVKVIFFGPSQKKLTQIDGEIKNMFQE
CCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHH
MLNSKAIDSACIGVAQAMNIKPHLENMGISLMPAGERVSYYVNQGYEVITF
HHCCCCHHHHHHHHHHHCCCCCCHHHCCEEEEECCCCEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA