| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920206
Identifier: 15920206
GI number: 15920206
Start: 46943
End: 47581
Strand: Direct
Name: 15920206
Synonym: ST0033
Alternate gene names: NA
Gene position: 46943-47581 (Clockwise)
Preceding gene: 15920205
Following gene: 15920207
Centisome position: 1.74
GC content: 32.39
Gene sequence:
>639_bases ATGACATGCTGGGCATTTTATGGTAAAGAGACTTTTAAAGATCATGCATTGGGAACTTTAAATTGCTTCAGAAACAACTT TGAGTATATAATTCCTATTTTATCTAAGAGGAGCGGAGAGAAGATAGAAAATGTAAGAAAAAGCATAGAAATTGCAGTCG CATTTCATGATATAGGTAAAGCATCAAAAAAATATATTAACTCATATTACGGACATGAGCTCTACAGCGGTTATATTATA AGTAGGATAATTAGAAATTGCTGTGATAACAAGCTGAGGGATATTGTAGCACTAGCAGCAATGAGTCATCATCAAGCTAT GGTAGAGAGAGGTTTAGAGCTTATAAAGAATAATATGTACGTTAGAATTCCTCAATTTGAATTTAATGAAGAATGCAAAG GAGATATTAATGAAGTTGCAAAGGAGATAAAAGTTAGTATAGATATTGACTTAACTTATATCACTCCAAATGACGTGGTC TCATGGCTTTTAAGAAACAAACACATAAAAGAGTTTTATTATTACCCTATAGTTCTTGGTCCCTTAATGATTTGTGATAC ATATACCGCGTACCAACACAGAAGCGATACACAATATGAAAACATATTAATAAGAGAATACAAGAGGTTCCTCATGTGA
Upstream 100 bases:
>100_bases AATACAGAAAGATCTTCATGAAAGGAGAAGAAAAAATGATATTACTTGCACTTAAGGCGGATAGTAGTTATTATGATAGT GAGAGGGGATTGAGGTTAAA
Downstream 100 bases:
>100_bases TATACTTAGCTATATTCAAAGTATCTGCTGACCGTGATACAATAATCCCCCCATTTTCGTCTAAGCTCTCAAGGTCTATA TTGGCTCATATATCTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTCWAFYGKETFKDHALGTLNCFRNNFEYIIPILSKRSGEKIENVRKSIEIAVAFHDIGKASKKYINSYYGHELYSGYII SRIIRNCCDNKLRDIVALAAMSHHQAMVERGLELIKNNMYVRIPQFEFNEECKGDINEVAKEIKVSIDIDLTYITPNDVV SWLLRNKHIKEFYYYPIVLGPLMICDTYTAYQHRSDTQYENILIREYKRFLM
Sequences:
>Translated_212_residues MTCWAFYGKETFKDHALGTLNCFRNNFEYIIPILSKRSGEKIENVRKSIEIAVAFHDIGKASKKYINSYYGHELYSGYII SRIIRNCCDNKLRDIVALAAMSHHQAMVERGLELIKNNMYVRIPQFEFNEECKGDINEVAKEIKVSIDIDLTYITPNDVV SWLLRNKHIKEFYYYPIVLGPLMICDTYTAYQHRSDTQYENILIREYKRFLM >Mature_211_residues TCWAFYGKETFKDHALGTLNCFRNNFEYIIPILSKRSGEKIENVRKSIEIAVAFHDIGKASKKYINSYYGHELYSGYIIS RIIRNCCDNKLRDIVALAAMSHHQAMVERGLELIKNNMYVRIPQFEFNEECKGDINEVAKEIKVSIDIDLTYITPNDVVS WLLRNKHIKEFYYYPIVLGPLMICDTYTAYQHRSDTQYENILIREYKRFLM
Specific function: Unknown
COG id: COG2254
COG function: function code L; Predicted HD superfamily hydrolase, possibly a nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25009; Mature: 24878
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCWAFYGKETFKDHALGTLNCFRNNFEYIIPILSKRSGEKIENVRKSIEIAVAFHDIGK CCEEEECCCHHHHHHCCHHHHHHHCCHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ASKKYINSYYGHELYSGYIISRIIRNCCDNKLRDIVALAAMSHHQAMVERGLELIKNNMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VRIPQFEFNEECKGDINEVAKEIKVSIDIDLTYITPNDVVSWLLRNKHIKEFYYYPIVLG EEECCCCCCCCCCCCHHHHHHHHEEEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHH PLMICDTYTAYQHRSDTQYENILIREYKRFLM HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TCWAFYGKETFKDHALGTLNCFRNNFEYIIPILSKRSGEKIENVRKSIEIAVAFHDIGK CEEEECCCHHHHHHCCHHHHHHHCCHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ASKKYINSYYGHELYSGYIISRIIRNCCDNKLRDIVALAAMSHHQAMVERGLELIKNNMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE VRIPQFEFNEECKGDINEVAKEIKVSIDIDLTYITPNDVVSWLLRNKHIKEFYYYPIVLG EEECCCCCCCCCCCCHHHHHHHHEEEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHH PLMICDTYTAYQHRSDTQYENILIREYKRFLM HHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA