| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is virE0
Identifier: 159162002
GI number: 159162002
Start: 205684
End: 205935
Strand: Direct
Name: virE0
Synonym: Atu6188
Alternate gene names: 159162002
Gene position: 205684-205935 (Clockwise)
Preceding gene: 159162001
Following gene: 16119804
Centisome position: 96.01
GC content: 56.35
Gene sequence:
>252_bases ATGCACGGTGATGATGTTGATCGGACGGCTTTCGTCCCGCGCAGGCTGCCGGCTGAAGCCGCTTACGTCGATAGTCAAGT TGACCTGGCGGCAAACCGACAACCTCACTGTGTGACTTGTTTTGAGCGACTTTTGGTTCAAGAGAAAGATGAAAACCGTC GACGATTGTGGGCTTCCGGCAAAGCATGCGCCACGTCTGAAGAGAGTTGTGCAGGAGGCCCTACACTCGCACCGGGCCAT TCGGGGCCATGA
Upstream 100 bases:
>100_bases ATGACGGAGGCTCGGATGGTAGATTCACCGAAGGCTCAATTCTATTAGGAGTCTTGATTGTGTCCGAAGAGTGACTGCCG CTGCAGCAGCCTAGAAAGCA
Downstream 100 bases:
>100_bases AGATGGAGCAAACCTTAATTTGCACCGATAATTTTCCGTTCGATGGATTTGGGCTGGGCAGGATCGGAGCGGAAGGCACT AGGAAAATCGTAATTTCTGT
Product: virA/G regulated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH SGP
Sequences:
>Translated_83_residues MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH SGP >Mature_83_residues MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASGKACATSEESCAGGPTLAPGH SGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): VIRE3_AGRT5 (P08061)
Other databases:
- EMBL: M15814 - EMBL: J03320 - EMBL: AE007871 - PIR: AB3251 - PIR: S11843 - RefSeq: NP_396508.2 - STRING: P08061 - GeneID: 1137511 - GenomeReviews: AE007871_GR - KEGG: atu:Atu6188 - NMPDR: fig|176299.3.peg.5393 - ProtClustDB: CLSK861988 - BioCyc: ATUM176299-1:ATU6188-MONOMER - GO: GO:0009405
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9021; Mature: 9021
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASG CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC KACATSEESCAGGPTLAPGHSGP CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHGDDVDRTAFVPRRLPAEAAYVDSQVDLAANRQPHCVTCFERLLVQEKDENRRRLWASG CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCC KACATSEESCAGGPTLAPGHSGP CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3549694; 2194232; 11743193; 11743194