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The map label for this gene is virD3

Identifier: 159162000

GI number: 159162000

Start: 197861

End: 199882

Strand: Direct

Name: virD3

Synonym: Atu6183

Alternate gene names: 159162000

Gene position: 197861-199882 (Clockwise)

Preceding gene: 16119798

Following gene: 41223312

Centisome position: 92.36

GC content: 55.98

Gene sequence:

>2022_bases
ATGGCAAATGAAGAGTTCACCAGACACTATGCGTGGCCCGTTCCTGTGGCTTCGAATGATGAAGGGCGTGGGACCGCGCG
GATCCCCATCCAGGCACAATCAATCGTTGCTGGAGAAGACGGTCGGGACACTTCGGTCCCAACGGCTTTGTCGCGACCGC
CAATTGAAGATATGCCGCACGGCGTCCAAGAAACATCGGCGAGTGGCGGACGACTGGGAGCGGCCCGTCTGCGGGATTCC
GTAATCCCGCCAGGAATATCCGAAGCCCGCACGGACCTATCCGCAATTTTGCGGAAAAAAAGCGGTTCTTTCCGCACCGG
TATGCAGTATCTGCGTGGGCTTGAACGGGAAAATTTTGATAAACAAGACAGGGAAGCCAGTGCGTTGCCAGATTTAAGTG
CAAGGGGCATAAAGCGACCGCGCGAAATTGAGTATCCCGGCAATGCAAGCGGATTAACCATAAAGAGGCAAGACGGCTTA
GGCATAGAGATCAATACTATCTCGGCATCTTCGCCCGTGAACCGGGCCGCGCATTCGTCGAACTGGCAAGGCGCGCCGGA
ACCGGGCGTGTACAATGTTCAGCCATCGGCAGATAGAGCACAGAACTCTGCGCAGGAAAGTTCGACGTTTCCCGATGGCA
CTTCTGTTTCCGCTCTCTATTCAGGCCCACTCGCAGAATGGTTCGAGAGGGATACTGGCAGCGAGACGACCAGGAATTCA
GGCAACACCATTTCGTCACCGCTCCGAGGGCTGGAGGAGTTCGGCGATTCCGCGGACAGCCGGTATCTTGGGCGCGAAGC
TCAGAGTCTTTCAGTTACCGTAACAACGCCTAATTCGAATGCTGAGGCAAGTTCTCATAGCGCACACACTGAAACTCTCG
ACGATGTCAGCAGTGACCGCTCGAGCGAACAGGGGAGGGGTCCCCTTGGCGCCGCAATCCTTGGATCCCATCATGACCTT
TCACCGCGTGCGCAGAAGTTATCACAAACAAACCGCGATTCCCCTGAACTGACCGACGCCGACCTGGCAAAAGTCGATGC
GGTGTTCGAATCTCTCTCCAAGGGGCCCCCGGCGGGGGAGAGCGCCGCACCGGACTTTCGTGAGCGCGGACCAGGCAGCG
CTTTCCAGAAAGAAGGCGTGTCCGACAGGGCGAACGGGGTGCCCACTAACTGGGAGGTACCTTTTGGTCGCGGTGGCGGG
CATTCACCGCAAGCGCTGAGGTCCTCAGGAGTGGAGCTCGATGACTTCCCTGATTTCACCGAGGCCGAACTGGCAAAAAT
CGACGCACTAGTCGAATCTCACTCCAACAGATCTTTATCAGTGCGAAATATAGTACCAGATTTGCGCGGAGCGGGAGCAG
ACAACGTCTTCCGGAAAGAAGGCGTTGTCGAACGCGCGGAGAAGATGCCGATCGATAGTGTGAGTCTTACCAGACTGAAT
GGCGAGCGTTCACGTTCACCGAAGACATCGCAAGCAAGCCTTGAGGATTTCCCCGATCTAACCGATGCCGATCTGGCCCA
TATCGAAGAGTCGGAGCGGATCGCAAGAACTGCTGTTGAAAAGGGGAAGCAAAAAATCTCGACCGAAGCCGATACGCGGT
TTGATTTGGGCAACTCTTCTGCACCCCGGGTTAGCCCTCGATCGGTTACCCCGTTGGTTCCCAATGCCAATCAGCCGATT
ACATCGTGGTTCTACGAGGCACAAAAGACTTGTGACAAATTGGTAGAGAACACTTACGTGAAGCCGGCCGTTGACAGTTC
TAGGGCGCGAAATGACGTCGAAAACACCGCTGCCAGGCTTGGTGACCCTGCTCCTGCTTTGGGGCATGACAATCTTGGTA
GAACTCGCGCGTTAACGCCCGTTCGCGACGTGATGTCTAGACCCAGCGCGGACCGACAACTGGCTAGTCATGCGGCAGAA
CATTCGGCAATAGACGACATTTGGAAACGGGATGACCGTGATCGCAGGACACACCCTTATAGAGGATTGGATTCGCGTTC
ACGTGAAGGTTGCGGGCGGTAA

Upstream 100 bases:

>100_bases
GTGAAGATGATGATGGAGAACCGAGTGAACGCAAACGCGAGAGAGATGAGCGCAGCAAGGACGGGCGTGGGGGAAATAGG
AGATAGAGAAGGACCGAGTG

Downstream 100 bases:

>100_bases
AGGCTGTGTTGTTCGCAGCAACACCCAAATCAAAAGCCCAATTTGCGATCGATCGAAGAATCTCGGTGAAGTGATGAATT
CGAGCAAGACTACGCCCCAG

Product: virA/G regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 673; Mature: 672

Protein sequence:

>673_residues
MANEEFTRHYAWPVPVASNDEGRGTARIPIQAQSIVAGEDGRDTSVPTALSRPPIEDMPHGVQETSASGGRLGAARLRDS
VIPPGISEARTDLSAILRKKSGSFRTGMQYLRGLERENFDKQDREASALPDLSARGIKRPREIEYPGNASGLTIKRQDGL
GIEINTISASSPVNRAAHSSNWQGAPEPGVYNVQPSADRAQNSAQESSTFPDGTSVSALYSGPLAEWFERDTGSETTRNS
GNTISSPLRGLEEFGDSADSRYLGREAQSLSVTVTTPNSNAEASSHSAHTETLDDVSSDRSSEQGRGPLGAAILGSHHDL
SPRAQKLSQTNRDSPELTDADLAKVDAVFESLSKGPPAGESAAPDFRERGPGSAFQKEGVSDRANGVPTNWEVPFGRGGG
HSPQALRSSGVELDDFPDFTEAELAKIDALVESHSNRSLSVRNIVPDLRGAGADNVFRKEGVVERAEKMPIDSVSLTRLN
GERSRSPKTSQASLEDFPDLTDADLAHIEESERIARTAVEKGKQKISTEADTRFDLGNSSAPRVSPRSVTPLVPNANQPI
TSWFYEAQKTCDKLVENTYVKPAVDSSRARNDVENTAARLGDPAPALGHDNLGRTRALTPVRDVMSRPSADRQLASHAAE
HSAIDDIWKRDDRDRRTHPYRGLDSRSREGCGR

Sequences:

>Translated_673_residues
MANEEFTRHYAWPVPVASNDEGRGTARIPIQAQSIVAGEDGRDTSVPTALSRPPIEDMPHGVQETSASGGRLGAARLRDS
VIPPGISEARTDLSAILRKKSGSFRTGMQYLRGLERENFDKQDREASALPDLSARGIKRPREIEYPGNASGLTIKRQDGL
GIEINTISASSPVNRAAHSSNWQGAPEPGVYNVQPSADRAQNSAQESSTFPDGTSVSALYSGPLAEWFERDTGSETTRNS
GNTISSPLRGLEEFGDSADSRYLGREAQSLSVTVTTPNSNAEASSHSAHTETLDDVSSDRSSEQGRGPLGAAILGSHHDL
SPRAQKLSQTNRDSPELTDADLAKVDAVFESLSKGPPAGESAAPDFRERGPGSAFQKEGVSDRANGVPTNWEVPFGRGGG
HSPQALRSSGVELDDFPDFTEAELAKIDALVESHSNRSLSVRNIVPDLRGAGADNVFRKEGVVERAEKMPIDSVSLTRLN
GERSRSPKTSQASLEDFPDLTDADLAHIEESERIARTAVEKGKQKISTEADTRFDLGNSSAPRVSPRSVTPLVPNANQPI
TSWFYEAQKTCDKLVENTYVKPAVDSSRARNDVENTAARLGDPAPALGHDNLGRTRALTPVRDVMSRPSADRQLASHAAE
HSAIDDIWKRDDRDRRTHPYRGLDSRSREGCGR
>Mature_672_residues
ANEEFTRHYAWPVPVASNDEGRGTARIPIQAQSIVAGEDGRDTSVPTALSRPPIEDMPHGVQETSASGGRLGAARLRDSV
IPPGISEARTDLSAILRKKSGSFRTGMQYLRGLERENFDKQDREASALPDLSARGIKRPREIEYPGNASGLTIKRQDGLG
IEINTISASSPVNRAAHSSNWQGAPEPGVYNVQPSADRAQNSAQESSTFPDGTSVSALYSGPLAEWFERDTGSETTRNSG
NTISSPLRGLEEFGDSADSRYLGREAQSLSVTVTTPNSNAEASSHSAHTETLDDVSSDRSSEQGRGPLGAAILGSHHDLS
PRAQKLSQTNRDSPELTDADLAKVDAVFESLSKGPPAGESAAPDFRERGPGSAFQKEGVSDRANGVPTNWEVPFGRGGGH
SPQALRSSGVELDDFPDFTEAELAKIDALVESHSNRSLSVRNIVPDLRGAGADNVFRKEGVVERAEKMPIDSVSLTRLNG
ERSRSPKTSQASLEDFPDLTDADLAHIEESERIARTAVEKGKQKISTEADTRFDLGNSSAPRVSPRSVTPLVPNANQPIT
SWFYEAQKTCDKLVENTYVKPAVDSSRARNDVENTAARLGDPAPALGHDNLGRTRALTPVRDVMSRPSADRQLASHAAEH
SAIDDIWKRDDRDRRTHPYRGLDSRSREGCGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VIRD3_AGRT5 (P18593)

Other databases:

- EMBL:   M11311
- EMBL:   J03320
- EMBL:   AE007871
- PIR:   AE3250
- PIR:   S11840
- RefSeq:   NP_396504.2
- STRING:   P18593
- GeneID:   1137506
- GenomeReviews:   AE007871_GR
- KEGG:   atu:Atu6183
- ProtClustDB:   CLSK539842
- BioCyc:   ATUM176299-1:ATU6183-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72606; Mature: 72475

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEEFTRHYAWPVPVASNDEGRGTARIPIQAQSIVAGEDGRDTSVPTALSRPPIEDMPH
CCCCHHHHHCCCCCCCCCCCCCCCEEEECEEECCEEECCCCCCCCCCCCCCCCCHHHCCC
GVQETSASGGRLGAARLRDSVIPPGISEARTDLSAILRKKSGSFRTGMQYLRGLERENFD
CHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
KQDREASALPDLSARGIKRPREIEYPGNASGLTIKRQDGLGIEINTISASSPVNRAAHSS
HHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHCCC
NWQGAPEPGVYNVQPSADRAQNSAQESSTFPDGTSVSALYSGPLAEWFERDTGSETTRNS
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCC
GNTISSPLRGLEEFGDSADSRYLGREAQSLSVTVTTPNSNAEASSHSAHTETLDDVSSDR
CCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
SSEQGRGPLGAAILGSHHDLSPRAQKLSQTNRDSPELTDADLAKVDAVFESLSKGPPAGE
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SAAPDFRERGPGSAFQKEGVSDRANGVPTNWEVPFGRGGGHSPQALRSSGVELDDFPDFT
CCCCCHHHCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCH
EAELAKIDALVESHSNRSLSVRNIVPDLRGAGADNVFRKEGVVERAEKMPIDSVSLTRLN
HHHHHHHHHHHHHCCCCCEEHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
GERSRSPKTSQASLEDFPDLTDADLAHIEESERIARTAVEKGKQKISTEADTRFDLGNSS
CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
APRVSPRSVTPLVPNANQPITSWFYEAQKTCDKLVENTYVKPAVDSSRARNDVENTAARL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GDPAPALGHDNLGRTRALTPVRDVMSRPSADRQLASHAAEHSAIDDIWKRDDRDRRTHPY
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RGLDSRSREGCGR
CCCCCCCCCCCCC
>Mature Secondary Structure 
ANEEFTRHYAWPVPVASNDEGRGTARIPIQAQSIVAGEDGRDTSVPTALSRPPIEDMPH
CCCHHHHHCCCCCCCCCCCCCCCEEEECEEECCEEECCCCCCCCCCCCCCCCCHHHCCC
GVQETSASGGRLGAARLRDSVIPPGISEARTDLSAILRKKSGSFRTGMQYLRGLERENFD
CHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
KQDREASALPDLSARGIKRPREIEYPGNASGLTIKRQDGLGIEINTISASSPVNRAAHSS
HHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHCCC
NWQGAPEPGVYNVQPSADRAQNSAQESSTFPDGTSVSALYSGPLAEWFERDTGSETTRNS
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCC
GNTISSPLRGLEEFGDSADSRYLGREAQSLSVTVTTPNSNAEASSHSAHTETLDDVSSDR
CCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
SSEQGRGPLGAAILGSHHDLSPRAQKLSQTNRDSPELTDADLAKVDAVFESLSKGPPAGE
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SAAPDFRERGPGSAFQKEGVSDRANGVPTNWEVPFGRGGGHSPQALRSSGVELDDFPDFT
CCCCCHHHCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCH
EAELAKIDALVESHSNRSLSVRNIVPDLRGAGADNVFRKEGVVERAEKMPIDSVSLTRLN
HHHHHHHHHHHHHCCCCCEEHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
GERSRSPKTSQASLEDFPDLTDADLAHIEESERIARTAVEKGKQKISTEADTRFDLGNSS
CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
APRVSPRSVTPLVPNANQPITSWFYEAQKTCDKLVENTYVKPAVDSSRARNDVENTAARL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GDPAPALGHDNLGRTRALTPVRDVMSRPSADRQLASHAAEHSAIDDIWKRDDRDRRTHPY
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RGLDSRSREGCGR
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2986128; 2194232; 11743193; 11743194