Definition Dinoroseobacter shibae DFL 12 chromosome, complete genome.
Accession NC_009952
Length 3,789,584

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Identifier: 159044517

GI number:

Start: 2084030

End: 2085007

Strand: Reverse

Name: Not Available

Synonym: Dshi_1971

Alternate gene names: NA

Gene position: NA

Preceding gene: 159044521

Following gene: 159044516

Centisome position: NA

GC content: NA

Gene sequence:

>978_bases
ATGCTGCTGAAGACCCCGATTGCGTTCTCGACGGCCCTGCCGGGGCTGGGCACGCCGATCCCGCGGGTGGCCGATGCGCT
GGCGACCATGTCCGGCGGAACGCTGAAGATGAAGGTGTACGAGCCCGGCAAGCTGGTCCCGGCCTTCGAGATCCTGGATG
CGGTGTCCTCGGGCAAGATCAACTCCGGCTACACCACCGCCGGGTATTGGGCGGGCAAGATCCCGGCGGCCCCCCTGTTC
TCGGCTGTGCCCTTTGGCCCCGAGGCGGGCGAGTACATGGCATGGCTCTATTACGGCAACGGCATGGATCTCTATCAGGA
GATGTATGACCAGGCCGGCTACAACGTGCATGTGCTGCCCTGCGCGATCCTGGCGCCCGAAACCTCGGGCTGGTTCGCCA
AGGAGATCACGTCGGCCGAAGATCTGAACGGGCTGAAGATGCGGTTCTTCGGGTTGGGCGGCAAGGTGATGCAGAAGTTG
GGCGTGGCCACATCGCTGCTGCCCGGCGGCGAGATCTTCCCGGCGCTGGAGAAGGGCGCCATCGACGCGACCGAGTTCTC
GATGCCCGCCATCGATGCACGGCTCGGTTTCCACAAGCTGGTGAAGTTCAACTACTTCCCCGGCTGGCACCAGCAGGCGA
CCGTGTTCGAGTTGATGATCAACAAGGACGTCTGGAACGACGCCAGCGAGCAGCACAAGGCGATCATCGAGAGCGCCTGC
AAGGCGTCCATGGCCGACAGCTTCGCCGAGGGTGAGGCGATCCAGCACGCGGCGCTGATCGACAACGTGGAAAAGAACGG
TGTCGAGATGAAGCAGTGGTCGCCGGAGATGCTAGAGCTGTTCCGGGCGACTTGGGACGAGGTGGCCGCAGAAGAAGCCG
CGAACGATGAATTCTTCGCCAAGGTACTGGCGGACATGACCACGTTCCGCGACGGCTACGCTCTGTGGAAGCGCAACGCC
TTCCTGCCGCGGGACTGA

Upstream 100 bases:

>100_bases
GGCCGAAAAAACTCGTGGAGGAAACATGAAAAAGACCCTGACCTGCCTGCTGGCCGCGGCGACGATGCTGACCGCGCCCA
TGGCCCATGCCGCCGACAAG

Downstream 100 bases:

>100_bases
CCGTGGCCCGGGGCGGCGCCCATGTGGCGTCGCCCCTCCTGATTTCCTGATTTTTCAGACAGTTGCACAAATCCGGCTGG
ACAGATGCGTCCGCCATTCA

Product: putative TRAP-transporter extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>325_residues
MLLKTPIAFSTALPGLGTPIPRVADALATMSGGTLKMKVYEPGKLVPAFEILDAVSSGKINSGYTTAGYWAGKIPAAPLF
SAVPFGPEAGEYMAWLYYGNGMDLYQEMYDQAGYNVHVLPCAILAPETSGWFAKEITSAEDLNGLKMRFFGLGGKVMQKL
GVATSLLPGGEIFPALEKGAIDATEFSMPAIDARLGFHKLVKFNYFPGWHQQATVFELMINKDVWNDASEQHKAIIESAC
KASMADSFAEGEAIQHAALIDNVEKNGVEMKQWSPEMLELFRATWDEVAAEEAANDEFFAKVLADMTTFRDGYALWKRNA
FLPRD

Sequences:
NA

Specific function: NA

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA