| Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
|---|---|
| Accession | NC_009952 |
| Length | 3,789,584 |
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Identifier: 159044509
GI number:
Start: 2057989
End: 2062884
Strand: Reverse
Name: Not Available
Synonym: Dshi_1962
Alternate gene names: NA
Gene position: NA
Preceding gene: 159044510
Following gene: 159044508
Centisome position: NA
GC content: NA
Gene sequence:
>4896_bases ATGACAGCAGACGGTGCCCACACGCGCCACGCTGACAACGAACCGATTGCAATCGTAGGCATCGCCTCGATCTATCCCGA GGCGCCGGACACGGCCACCTATTGGCGCAACATCACCGACAAGGTGGATGCGGTGGCCGATGCGCCGGCCGATTGGTGCG CGGATCTGTTCTTTGACCCCGAGAGCGCGGATAACGACCGGATCTACACCAAGCGCGGTGGGTTCCTGCGCGATCTCGCG GTGTTCGACCCGCTGCGCCACGGGGTCATGCCGACCTCCATCGACGGGGGGGAGCCGGACCAGTTCCTCGCGTTGCAGGT GGCCGCCGACGCGGTGGAGGATGCCGGTTTCGCCGCGCGCCCCGTCCCCGGCGAACGGGTGGCGGTGATCCTGGGCCGCG GCACCTATATCAACCGCGGCTTCACCAGCGTGGTGCAGCACGGGATCATGGTGGATCGCTTCCTGTCGATCCTGAAAAAG CTCCATCCCGACACCGACGCGGAAGAGCTGGCCGAGGTCAAGGCGCAGCTCAAGGCCTCCCTGCCGCCCTTCAATGCGGA AATGGCCCCGGCCCTGGTGCCGAACCTGGTGACGGGGCGGATCTCCAACCGGCTGGACTTCAAGGGCGCCAATTACATCG TGGACGCGGCCTGCGCCTCGTCGCTCATCGCCATGGATCGCGGGGTTGCGGACCTGCGGGCGGGGCGGTGCGACATGGCG GTGGTGGGCGGTGTGCATGCCTCCACCCCCGCACCGATCTACCAGATCTTCTGCCAGCTCGAAGCGCTGTCGCGGAAGGG GTCGATCAAACCGTTCTCGGCCAATGCCGATGGCACGCTTCTGGGCGAGGGCGTCGGGCTGATGTGCATCAAGCGGCTTT CCGATGCGGAGGCCGCGGGCGACCGGATCTACGCGCTGGTGCGCGGGGTCGGCGTGGCCAGCGACGGCAAGGGGCTGGGC ATTCTCGCCCCCCGGATAGAGGGGGAGACACTCGCGCTCCAGCGCGCCTATGAGGATGCCGGGGTCGATCCGGCCACCGT GGGTCTGATCGAGGCCCATGGCACGGCGACCGCCCTGGGCGACGCGACGGAGGTCGAGGCGCTCGTGGGCCTGATGGGGA CGCGCGACAGCGACGCGCCGTCCTGCGCGCTGGGCTCGGTGAAGTCGATGATCGGGCATTGCCTGCCCGCCTCGGGCTCG GCCGGAATCATCAAGACCGCGCTGGCGCTCTATCACAAGACCCTGCCGCCCACCTTGCTGGACGAGGCGAACCCTGAGTT GGGGATCGAAGGCTCGCCGCTCTACCTGAACACCGAAACCCGACCCTGGATCCACGGGCTGGACACGCCCCGGCGGGCGG GGGTGAACGCCTTCGGCTTCGGCGGGATCAATGCCCATACGGTGCTGGAAGAATATCGCGGCGGGGCGGAGCCTGCACCG AACCTCACCCGGTCGAGCGAGCTTCTGGTGGCGGGCGCGCCGGATGCGTCGGGACTGAGCGCACGGCTGGAGGCGCTGAA AACCGCGCTATCTGGCGACATGCCCCCGGCAGAGGTCGCGCGGGTCGAGAATGCCGCCCCGTGCCCCGGCCCCTGGCGCG CGGCCATCGTGGCCCGGGACGCGGGCGATGCCATGGCCAAGATCGACAAGATCCTCGGCCGGATCGCCAGCGGCAAGGAC CGGCTCAGGGATCGCAAGGGGGCGTATCTGAACGCGGCACCGCTGGCCGCCACGGGCAAGGTCGCCTTCATGTTCCCCGG GGAGGGGAGCCAGCATCTGGGCATGCTGCGCGAGATCATGCTGCATTACCCCCGGATGCGGCAGTGGTTCGACCTGGTGG ACGGGGCCTTCGCGGGCCATGGCCGCAACCTGCTGCCGAGCCAGGTGATCTTCCCGCCCCCCGGCACCGCCGAAGAGGGC GGCGCGCTGTGGCGGATGGATATCGGGCCAGAGGCGATTTTCGCCGCAAATCAATCGGTTGCGGCGCTGTATGAAAGCAT CGGCTTGCGCCCGGACATGCTGGTCGGCCATTCCACGGGGGAATACTCGGCGCTCTTTGCCGCCGGGGTGACGCGGCGCG AAGATCCGGCCGTTCTCCAGGCGGAGATGCGCGCGCTCAACGCGGAATACGAGGCGATGGCGGCCGAGGGGCTGATCGCC GAGGGCGCGCTGGTGGCGCTCGGCGCGGTGGATGGCGCGGCGCTGGAGGACAAGCTGGCCGGGCGCGACGATGTTTATCT GGCCATGGACAACTGCCCCAACCAGAAGGTCGTGGCGGCGTTTTCCGACGCGGGCCGCGACTATGCCCTGAGCCTCGCGC CCGCGCTGGGCGGGTTCGACGAGCTCTTGCCGTTCTCGCGCGCCTATCACAGCCCGGCCTTCGCACCGTTCAGCGCGCGG CTCGAAGGGTTCCTCGCGGGGATGCAGGTCGCGGCCCCCGAACGCCCGGTCTATTCCTGCCTGAGCACCGCGCCCTTTCC AGACTCGCCCGACGCGATCCGCAAGCTGACCGCCGACCAATGGTCCGGGCGGGTGCGTTTCGTCGAGACGGTGGAGCGGA TGTATGCGGACGGGGCGCGGGTCTTCGTCGAATGCGGGCCGCGCAACAACCTGTCGGCCTTCGTGAACGACATCCTGCGC GGGCGCGATCATGTGGCGGTGGCGGTGGACACGCCGTCCTTGCAGGGGCTCGACCAGCTGCACCACATGGCCGCCCAGCT GGTGGTGGAGGGGGTGACGCTCGACCTCGGCGCGCTGGCGGCCCCGGTGCGGGCGGTGGCGAAGCCGGCCGGTCCGAGCC GTCCGCAGGTGCTCAAGATGGGGGTGCAGCCCATGGATATCGCGTCGGTTCCCAAGCGGGCGCAGAGCGCGCCGTCCAAG GCACCGCCCGCGCCGAAACCCGCCCCCGCGGCACCGCCCCCCGCCGCGTCGCAAACCCGTCCCACCGCCAACTCGCCCGC CGCCCCGACACCGCCGAAGATGCCGGTGACGGTCGCCGCGGCACCCCGGCCGCAGCCCGCGCCCGCCGCGCCCCCGGCAG AGGCCGAAGCGGTGGTCGACGCCTATTTCGACACGCTGGAGGGCTTCCTCGCCTCCGAGACCGAGATCATGGCCGCCTAT CTCGGCACGGTGCCGGGACAGGCGGACGCGGCCCCCACGCCCATGCCCACTCCACAGACCCAAGCGCCCCGGCGGTTCCC GATGCTCGGGGCGGTGACCCCGGCCCCCGACGGTCGCAGCCTGACCGCCCGGATCGAGATCGACCCGGCCCGCGCGCCCT ACCTGCGCGATCACAGCTTCGGCCACGGCATTTCCCAGCGCGACCCGGAGCTGACCGGCCTGCCGGTGGTGCCGCTGACC TTCTCGATGGAGGCGCTGGCCGAGGCCGCCGCGGCCCTGCGCCCGGACCTGGTGGTGACGGGGATGCGGGAGGTGCGCGC CTCGCGCTGGTTCGCCCTGGATCGCCCGCCCCTGGTGGTGGAGGCTGCGGCGGAACTGCGCGAAGAGGGGCCCGTGACCG TGGTGCGCGTGCGGATCCGCGCCGCCGATGGCCCGGCGCTGCGCCCGACCCTGATCGAGGCGGATGTGACCCTGGCCCAA GCGCGCCCGGAGGCGCCCCTGGCCCAGCCCCAGAGCTATGGCGCCCTGCGCGACGCGCCCTGGTCGCTTGCGGATGTCTA CGGCAAGATCATGTTCCACGGTCCCAAGCTGCAGGCGGTGGAGGCCATGGATGTGGTCGGCGCAGGCGGGGTGGAAGGCA CCCTGATCGGGCTGCCCCATGACGCGCTCTATGCCGGGGTCGCCGACCCGGGCTTCGAGACCGACGCGATCACCCTTGAC GCGGTGGGCCAGCTGGTCGGCGTCTGGTCGGCGGAAATGCTGCCCGAGGCGTTCCACATCTTCCCCTTCCGGGTCGAGGC GCTGGAGATCTTCCGCGACCGCCTCGCCCCCGGCGAGCGCGCGCGCTGCCGCGCGACCATCGATCTGGTGGGCGCGGACG AGATGCGCGCCGATATCGACGTGGTCTCGGCCGACGGGCGGCTGCAATGCCGGATCGCGGGCTGGTGGGACAAGCGGTTC AACCTGCCCGAGCGGTTCTTCCGGGCCCGGCTCGACCCGCCGCGCAATCCGCTCTCGGCGCCCATCGTGCTGCCGGGGGG CGCGCCGTTGCCCGAGGGCTGCGCGCTGCAGCTCTGTGACGAGATCGGTGACGATCTGCTGGACGGCTCCGGTGGGATCT GGGCCAAGGTGCTGGCGGGGCTTGTCCTGTCCCGGGCCGAGCGGGCGGAATTCGCCGCCATGGACGGGGCCACGGACAAG CGGCGCTGGGAATGGCTGCGCGGGCGCGCGGCGGCCAAGGATGCGGCCCGCGCGGTGCTGGGCCGCGCGCTCGCGCCCGC GGACATTCCCCTGGTCGTGCCGGGGGAGGATGCAGGCCCGGTGATCGACCCGACCCTGCCGCCCGCCTGGGGGCCTGCGC CGCTTATCTCGATCGCCCACAAGGGTGCGCGCGCCCTGGGCCTGGCGGCCGATCCGCGCCGCTATGCCGGGGTGGGCGTG GATCTCGAAGAGATCGCGCCGCGCACGCCCGCGTTCCTGCAGACCGCCTTCACCCCCGCCGAGCGCGCCTCGATCATGGC CCTGCCCGAAGGACAGCCGCGCGATACGGCAGCGACCCGCTATTGGTGCGCAAAGGAAGCAGTCGGCAAAAGCTTCGGGC TCGGCCTCGCCCAGGCCCTTGATCGTTTCGAGGTTCAGGGTGATGGAACGGACGCCCCGCCCGTGATTGTTCGGGATCTG TCAACACACACCGATATTGCGGTGACCGCGATGGCCGAGCTTGCGCCGGGCCTGATCGCCGCCGTCGTGCTCAGACCGCA GGACGCAGGAAATTGA
Upstream 100 bases:
>100_bases CGAGCGCCCCGGAGGTGGTTTGGGGACGCGGCCCGTGGGAGACGGATGCGGAGACCTACGCCCGCACCTACGGCGCAGGC GGCACCAGAGAGGCGGCGGA
Downstream 100 bases:
>100_bases AAGGCCAGAGGATAAAACCATGACACCCGTGAGCTATGATGACGCCTACAAGGTGATGCAGGAGATTTTCGAGGATCTTG CCGACGACCTGGGCGAGGAC
Product: putative modular PKS system
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1631_residues MTADGAHTRHADNEPIAIVGIASIYPEAPDTATYWRNITDKVDAVADAPADWCADLFFDPESADNDRIYTKRGGFLRDLA VFDPLRHGVMPTSIDGGEPDQFLALQVAADAVEDAGFAARPVPGERVAVILGRGTYINRGFTSVVQHGIMVDRFLSILKK LHPDTDAEELAEVKAQLKASLPPFNAEMAPALVPNLVTGRISNRLDFKGANYIVDAACASSLIAMDRGVADLRAGRCDMA VVGGVHASTPAPIYQIFCQLEALSRKGSIKPFSANADGTLLGEGVGLMCIKRLSDAEAAGDRIYALVRGVGVASDGKGLG ILAPRIEGETLALQRAYEDAGVDPATVGLIEAHGTATALGDATEVEALVGLMGTRDSDAPSCALGSVKSMIGHCLPASGS AGIIKTALALYHKTLPPTLLDEANPELGIEGSPLYLNTETRPWIHGLDTPRRAGVNAFGFGGINAHTVLEEYRGGAEPAP NLTRSSELLVAGAPDASGLSARLEALKTALSGDMPPAEVARVENAAPCPGPWRAAIVARDAGDAMAKIDKILGRIASGKD RLRDRKGAYLNAAPLAATGKVAFMFPGEGSQHLGMLREIMLHYPRMRQWFDLVDGAFAGHGRNLLPSQVIFPPPGTAEEG GALWRMDIGPEAIFAANQSVAALYESIGLRPDMLVGHSTGEYSALFAAGVTRREDPAVLQAEMRALNAEYEAMAAEGLIA EGALVALGAVDGAALEDKLAGRDDVYLAMDNCPNQKVVAAFSDAGRDYALSLAPALGGFDELLPFSRAYHSPAFAPFSAR LEGFLAGMQVAAPERPVYSCLSTAPFPDSPDAIRKLTADQWSGRVRFVETVERMYADGARVFVECGPRNNLSAFVNDILR GRDHVAVAVDTPSLQGLDQLHHMAAQLVVEGVTLDLGALAAPVRAVAKPAGPSRPQVLKMGVQPMDIASVPKRAQSAPSK APPAPKPAPAAPPPAASQTRPTANSPAAPTPPKMPVTVAAAPRPQPAPAAPPAEAEAVVDAYFDTLEGFLASETEIMAAY LGTVPGQADAAPTPMPTPQTQAPRRFPMLGAVTPAPDGRSLTARIEIDPARAPYLRDHSFGHGISQRDPELTGLPVVPLT FSMEALAEAAAALRPDLVVTGMREVRASRWFALDRPPLVVEAAAELREEGPVTVVRVRIRAADGPALRPTLIEADVTLAQ ARPEAPLAQPQSYGALRDAPWSLADVYGKIMFHGPKLQAVEAMDVVGAGGVEGTLIGLPHDALYAGVADPGFETDAITLD AVGQLVGVWSAEMLPEAFHIFPFRVEALEIFRDRLAPGERARCRATIDLVGADEMRADIDVVSADGRLQCRIAGWWDKRF NLPERFFRARLDPPRNPLSAPIVLPGGAPLPEGCALQLCDEIGDDLLDGSGGIWAKVLAGLVLSRAERAEFAAMDGATDK RRWEWLRGRAAAKDAARAVLGRALAPADIPLVVPGEDAGPVIDPTLPPAWGPAPLISIAHKGARALGLAADPRRYAGVGV DLEEIAPRTPAFLQTAFTPAERASIMALPEGQPRDTAATRYWCAKEAVGKSFGLGLAQALDRFEVQGDGTDAPPVIVRDL STHTDIAVTAMAELAPGLIAAVVLRPQDAGN
Sequences:
NA
Specific function: NA
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA