Click here to switch to the map view.

The map label for this gene is 159041885

Identifier: 159041885

GI number: 159041885

Start: 1396561

End: 1396944

Strand: Reverse

Name: 159041885

Synonym: Cmaq_1321

Alternate gene names: NA

Gene position: 1396944-1396561 (Counterclockwise)

Preceding gene: 159041889

Following gene: 159041884

Centisome position: 67.24

GC content: 43.75

Gene sequence:

>384_bases
GTGGCTGAGGCGTGGGTTAATAAGGCTAGGAGACTTAAGGATTATGCTAGGGAGGATTTTATAAATGGTAGATTTGACTC
TGCATCCTTCTTCGCTCAACAGTCCGTTGAACTACTGTTAAAGGGTATTTTAATAAGATTAACAGGTTCAAGACCCATAA
CCCACTCTACGTCAGAGCTCTTGACGTATCTTACCAAGATTCTGAATAAAGATGCACCACAGGACGTCATTAGGTGTTCT
GAGCTTCTTGAGCAGCACTATGTGCAGGCCAGGTATCCTGATGCTAGGATTAATGAGTATAAAAGCTGGGAGGCTGAAGA
AGCCATTAAGTGTATGGAGGTGGTGTGGAGTTATGTTCAGCAGGTGGTTAACAACCCTCAGTGA

Upstream 100 bases:

>100_bases
TAATTTAATAAGCATTAATTAATGGCTCCAGCTTTCGGATTAGTTAATCGCCTTCTCCATCATATAAAGTTTAATAACTT
AAGGCATAATTCTTTCATCA

Downstream 100 bases:

>100_bases
GGTTTCTAGGATTAGGGAGAATAGGTTTAAGGAGACTTTGAATGAATTATGCAGTAGGGCGCTTGTCGTAGTATTATTTG
GTTCAAGGGCTAGGGGTGAT

Product: HEPN domain-containing protein

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAEAWVNKARRLKDYAREDFINGRFDSASFFAQQSVELLLKGILIRLTGSRPITHSTSELLTYLTKILNKDAPQDVIRCS
ELLEQHYVQARYPDARINEYKSWEAEEAIKCMEVVWSYVQQVVNNPQ

Sequences:

>Translated_127_residues
MAEAWVNKARRLKDYAREDFINGRFDSASFFAQQSVELLLKGILIRLTGSRPITHSTSELLTYLTKILNKDAPQDVIRCS
ELLEQHYVQARYPDARINEYKSWEAEEAIKCMEVVWSYVQQVVNNPQ
>Mature_126_residues
AEAWVNKARRLKDYAREDFINGRFDSASFFAQQSVELLLKGILIRLTGSRPITHSTSELLTYLTKILNKDAPQDVIRCSE
LLEQHYVQARYPDARINEYKSWEAEEAIKCMEVVWSYVQQVVNNPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14797; Mature: 14666

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAWVNKARRLKDYAREDFINGRFDSASFFAQQSVELLLKGILIRLTGSRPITHSTSEL
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LTYLTKILNKDAPQDVIRCSELLEQHYVQARYPDARINEYKSWEAEEAIKCMEVVWSYVQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
QVVNNPQ
HHHCCCC
>Mature Secondary Structure 
AEAWVNKARRLKDYAREDFINGRFDSASFFAQQSVELLLKGILIRLTGSRPITHSTSEL
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LTYLTKILNKDAPQDVIRCSELLEQHYVQARYPDARINEYKSWEAEEAIKCMEVVWSYVQ
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
QVVNNPQ
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA