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The map label for this gene is 159041884

Identifier: 159041884

GI number: 159041884

Start: 1396179

End: 1396592

Strand: Reverse

Name: 159041884

Synonym: Cmaq_1320

Alternate gene names: NA

Gene position: 1396592-1396179 (Counterclockwise)

Preceding gene: 159041885

Following gene: 159041881

Centisome position: 67.22

GC content: 43.0

Gene sequence:

>414_bases
ATGTTCAGCAGGTGGTTAACAACCCTCAGTGAGGTTTCTAGGATTAGGGAGAATAGGTTTAAGGAGACTTTGAATGAATT
ATGCAGTAGGGCGCTTGTCGTAGTATTATTTGGTTCAAGGGCTAGGGGTGATTATACGCCTTTAAGTGACTGGGATCTGC
TAGCCATTGTTGCTGATGGTGAATACAGGGTTGAGATAATGGATGTTGGGCAGGTGGTTTGGCTGCCTCTAAGTAGGCTT
AATAATGTACTTAAGAACTCAATGATAATACTTGACGCCGTAACTGATGGTAAGGTGCTTTGCGGGGATTCTAGAATATT
TGAGGTGGTTAAAGGTAGGGTTAACGAGTATATTGAGGAGATGAGACTGGTAAGGACTAAGCATGGTTGGTTCCCTAAGA
ATACTACCGCATGA

Upstream 100 bases:

>100_bases
CAGCACTATGTGCAGGCCAGGTATCCTGATGCTAGGATTAATGAGTATAAAAGCTGGGAGGCTGAAGAAGCCATTAAGTG
TATGGAGGTGGTGTGGAGTT

Downstream 100 bases:

>100_bases
GGTTCAGTAACTAGGTGGATTAATTACCATCAATGAGTGTGGAAACGCATGATAAGGACGTTGAAAATAATTATGAGAGA
AGCTAATACCCTACTATTCA

Product: DNA polymerase subunit beta

Products: NA

Alternate protein names: DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Domain Protein Region

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFSRWLTTLSEVSRIRENRFKETLNELCSRALVVVLFGSRARGDYTPLSDWDLLAIVADGEYRVEIMDVGQVVWLPLSRL
NNVLKNSMIILDAVTDGKVLCGDSRIFEVVKGRVNEYIEEMRLVRTKHGWFPKNTTA

Sequences:

>Translated_137_residues
MFSRWLTTLSEVSRIRENRFKETLNELCSRALVVVLFGSRARGDYTPLSDWDLLAIVADGEYRVEIMDVGQVVWLPLSRL
NNVLKNSMIILDAVTDGKVLCGDSRIFEVVKGRVNEYIEEMRLVRTKHGWFPKNTTA
>Mature_137_residues
MFSRWLTTLSEVSRIRENRFKETLNELCSRALVVVLFGSRARGDYTPLSDWDLLAIVADGEYRVEIMDVGQVVWLPLSRL
NNVLKNSMIILDAVTDGKVLCGDSRIFEVVKGRVNEYIEEMRLVRTKHGWFPKNTTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15750; Mature: 15750

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRWLTTLSEVSRIRENRFKETLNELCSRALVVVLFGSRARGDYTPLSDWDLLAIVADG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC
EYRVEIMDVGQVVWLPLSRLNNVLKNSMIILDAVTDGKVLCGDSRIFEVVKGRVNEYIEE
CEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHH
MRLVRTKHGWFPKNTTA
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFSRWLTTLSEVSRIRENRFKETLNELCSRALVVVLFGSRARGDYTPLSDWDLLAIVADG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC
EYRVEIMDVGQVVWLPLSRLNNVLKNSMIILDAVTDGKVLCGDSRIFEVVKGRVNEYIEE
CEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHH
MRLVRTKHGWFPKNTTA
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA