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The map label for this gene is ydaO [C]

Identifier: 159041820

GI number: 159041820

Start: 1326359

End: 1327372

Strand: Reverse

Name: ydaO [C]

Synonym: Cmaq_1255

Alternate gene names: 159041820

Gene position: 1327372-1326359 (Counterclockwise)

Preceding gene: 159041821

Following gene: 159041819

Centisome position: 63.89

GC content: 44.97

Gene sequence:

>1014_bases
ATGGTTACTTTATGCGATAGGTGTGGTGTTAGGGAGGCTAAGTACCTTAAGGCATCCAGTGGTGAGAAACTATGCTTAAA
CTGCCTATTCAACACCATTGAGGATACTGTGGCTAGGACTGTGAGGAGGTTTAGGTTAATCACAAGTGGTGATAGGGTTG
GTATAGCGGTAAGTGGCGGTAAGGATAGCCTAGTACTCATGTATCTTCTAGGTAAGTTACGGAGACTAGGTAGGATACCT
AAGGATACTGTCTTAATAGCCTTCAGTATTGATGAGGGGCAACCCTACAGTTGCGTTAGGAGAGCCAACTCAATGGACTA
CGTGGCTAAGTTAACTGAGGAATTTAACATTGAGTATAAGGTATTCAGGTTCAGTGAATTATTCGGGGTAACGGCGTTTG
ATATTGCACAGGGATTATGGGGTAAGGGGGTTAACACGCACATGTGTACTATATGCGGTGTCATGAGGAGGAGGGCAATG
AATATAGTGGGTAGGATGCTTAACTTAACCAAGATAGCCACGGGGCATAATCTTGATGATGAAGCACAGACAGTGCTCCT
TAACGTCACCGGTAATGATGTTAAACGCTTCGCCTGGTTTGGGGCAACGCCAAGTAATGATGTCGCCGAGGAGGAGTTCA
TACCTAGGATTAAACCCCTGAGATTCATTAGGGAGGAGGAGGTGGCTCTATACGCCTACTACCATGGAATACCCTTAATG
ACCATTGAATGCCCCTTCGTCTACAATAATCCACGCTACGAATTAAAATTCACCCTAGCCAGGTGGGAGAGGGATAATCC
TAATGTTAAGTACTCAATGGTTTCCTTCGGTGATGAAGTCTCAAAAATGGTTAATGAGAGGTTTAAGGGACAGGTTAAAC
TCAATAAATGCATCCACTGCGGCTTCCCAACCTCAGGAAGCGTGTGCAGGGTGTGTGAACTGCTTAAGCAGGCTGGGTTA
CTTGAAAGGTACATAAACCATATAAGACCAGTTAACACTCAACAGGGTGCATGA

Upstream 100 bases:

>100_bases
AGTGGTTATTTTCACAATTAGGCTCCTCCTGCTTCAATGAGTACTCATTAAATAACAGCTTAGTAAGCTATTTTAATCAG
TGTTAAAGCCATGAAGTAGC

Downstream 100 bases:

>100_bases
TTTAGAGCGCACTAGGGTTACATTACGTGTGCTAATCAGTTATTGACGCAATGACTGCTAATAAACCTTATTAATCCCAG
TAATTTTAGGTGAACTGTGG

Product: PP-loop domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MVTLCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGGKDSLVLMYLLGKLRRLGRIP
KDTVLIAFSIDEGQPYSCVRRANSMDYVAKLTEEFNIEYKVFRFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAM
NIVGRMLNLTKIATGHNLDDEAQTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVALYAYYHGIPLM
TIECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHCGFPTSGSVCRVCELLKQAGL
LERYINHIRPVNTQQGA

Sequences:

>Translated_337_residues
MVTLCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGGKDSLVLMYLLGKLRRLGRIP
KDTVLIAFSIDEGQPYSCVRRANSMDYVAKLTEEFNIEYKVFRFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAM
NIVGRMLNLTKIATGHNLDDEAQTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVALYAYYHGIPLM
TIECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHCGFPTSGSVCRVCELLKQAGL
LERYINHIRPVNTQQGA
>Mature_337_residues
MVTLCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGGKDSLVLMYLLGKLRRLGRIP
KDTVLIAFSIDEGQPYSCVRRANSMDYVAKLTEEFNIEYKVFRFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAM
NIVGRMLNLTKIATGHNLDDEAQTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVALYAYYHGIPLM
TIECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHCGFPTSGSVCRVCELLKQAGL
LERYINHIRPVNTQQGA

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=314, Percent_Identity=31.5286624203822, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1787606, Length=263, Percent_Identity=25.4752851711027, Blast_Score=81, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17540090, Length=308, Percent_Identity=31.8181818181818, Blast_Score=137, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6321227, Length=158, Percent_Identity=29.1139240506329, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651972, Length=321, Percent_Identity=33.6448598130841, Blast_Score=158, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 38274; Mature: 38274

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGG
CCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECC
KDSLVLMYLLGKLRRLGRIPKDTVLIAFSIDEGQPYSCVRRANSMDYVAKLTEEFNIEYK
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCEEE
VFRFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAMNIVGRMLNLTKIATGHNLDD
EEEEHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EAQTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVALYAYYHGIPLM
CCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCEEEEEEECCCEEE
TIECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHC
EEECCEEECCCCEEEEEEEEECCCCCCCEEEEEEHHCHHHHHHHHHHHCCCEEEEEEEEE
GFPTSGSVCRVCELLKQAGLLERYINHIRPVNTQQGA
CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVTLCDRCGVREAKYLKASSGEKLCLNCLFNTIEDTVARTVRRFRLITSGDRVGIAVSGG
CCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECC
KDSLVLMYLLGKLRRLGRIPKDTVLIAFSIDEGQPYSCVRRANSMDYVAKLTEEFNIEYK
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCEEE
VFRFSELFGVTAFDIAQGLWGKGVNTHMCTICGVMRRRAMNIVGRMLNLTKIATGHNLDD
EEEEHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EAQTVLLNVTGNDVKRFAWFGATPSNDVAEEEFIPRIKPLRFIREEEVALYAYYHGIPLM
CCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCEEEEEEECCCEEE
TIECPFVYNNPRYELKFTLARWERDNPNVKYSMVSFGDEVSKMVNERFKGQVKLNKCIHC
EEECCEEECCCCEEEEEEEEECCCCCCCEEEEEEHHCHHHHHHHHHHHCCCEEEEEEEEE
GFPTSGSVCRVCELLKQAGLLERYINHIRPVNTQQGA
CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]