| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is uxaA [H]
Identifier: 159041706
GI number: 159041706
Start: 1197981
End: 1198280
Strand: Reverse
Name: uxaA [H]
Synonym: Cmaq_1141
Alternate gene names: 159041706
Gene position: 1198280-1197981 (Counterclockwise)
Preceding gene: 159041711
Following gene: 159041705
Centisome position: 57.68
GC content: 42.33
Gene sequence:
>300_bases ATGGCTAGGTTCGCGATACATAATAAGGAGGATAACGTGGGGGTAGCCATAGATGATATAAGTGCCGGGGAGGAGGCTCA CGGCGTATACATTGAGGATAAGTCCAATGGACCTATAGTTAAGGCTATTGAGGATATTCCACTTGGCCATAAGATTGCTT TAAGGGATATTAAGGCTGGGGAGAAGGTTATTAAGTATGGTAGGGTAATTGGGGTTGCTGTGAAGGATATTAAGGCTGGG GAACATGTTCATACACATAATCTAAAATCATTAAGGTGGGGTAACTTAAGTAAAAGGTGA
Upstream 100 bases:
>100_bases ATTAGATATTTTTCAAATGACCTTAACTAGAAGGCTTAACACCATGATTGATTCACATGTATACGGAAAAGTATAAAACT CTACAGTTAATCCGTCTACT
Downstream 100 bases:
>100_bases GTGATGTGGCTGGCAAATACCCAACCATTAAGGCGTACATTAGGCCTGATGGAAGCGTAGGGGTAAGGAACCACGTAGCC ATAATACCCATTGATGACTT
Product: SAF domain-containing protein
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MARFAIHNKEDNVGVAIDDISAGEEAHGVYIEDKSNGPIVKAIEDIPLGHKIALRDIKAGEKVIKYGRVIGVAVKDIKAG EHVHTHNLKSLRWGNLSKR
Sequences:
>Translated_99_residues MARFAIHNKEDNVGVAIDDISAGEEAHGVYIEDKSNGPIVKAIEDIPLGHKIALRDIKAGEKVIKYGRVIGVAVKDIKAG EHVHTHNLKSLRWGNLSKR >Mature_98_residues ARFAIHNKEDNVGVAIDDISAGEEAHGVYIEDKSNGPIVKAIEDIPLGHKIALRDIKAGEKVIKYGRVIGVAVKDIKAGE HVHTHNLKSLRWGNLSKR
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789475, Length=80, Percent_Identity=45, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 10844; Mature: 10712
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFAIHNKEDNVGVAIDDISAGEEAHGVYIEDKSNGPIVKAIEDIPLGHKIALRDIKAG CCCEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCC EKVIKYGRVIGVAVKDIKAGEHVHTHNLKSLRWGNLSKR HHHHHHCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure ARFAIHNKEDNVGVAIDDISAGEEAHGVYIEDKSNGPIVKAIEDIPLGHKIALRDIKAG CCEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCC EKVIKYGRVIGVAVKDIKAGEHVHTHNLKSLRWGNLSKR HHHHHHCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]