| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041671
Identifier: 159041671
GI number: 159041671
Start: 1164047
End: 1164262
Strand: Reverse
Name: 159041671
Synonym: Cmaq_1105
Alternate gene names: NA
Gene position: 1164262-1164047 (Counterclockwise)
Preceding gene: 159041672
Following gene: 159041669
Centisome position: 56.04
GC content: 35.65
Gene sequence:
>216_bases GTGAGTAAAATGAACATTCCAAGAAGAAGTTTCACATTAGGTTTAACTAAAGGAATCATGAGGAATAGAATCACCAATGT TAAGGTTAACAACACATATATAGACTATGAGCAAGATAATAGGAAACCCAGTAATGAAGTATTCGTGATTTACGGCGGCT TAACATTCACCACATTCACCTACGATACCGCCTCAAGAACATACAGGGTTAATTAA
Upstream 100 bases:
>100_bases AATCACCTATATTGATCACTGAATCCCCTATATTAACTATGAGTTAAGTTTTCTGAAAGGAGAAAGTTTTATAAAACCTA GGGTGGGAGAGTAACTCGAG
Downstream 100 bases:
>100_bases TCAAGATCACGCTAAAACTAGCTTATGCTATGATTAAGCCAAGTGAATGAGGGCTTAAGCACTTTGTGGTTGTAGATTTA ATGAAGTGGCTAAGGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSKMNIPRRSFTLGLTKGIMRNRITNVKVNNTYIDYEQDNRKPSNEVFVIYGGLTFTTFTYDTASRTYRVN
Sequences:
>Translated_71_residues MSKMNIPRRSFTLGLTKGIMRNRITNVKVNNTYIDYEQDNRKPSNEVFVIYGGLTFTTFTYDTASRTYRVN >Mature_70_residues SKMNIPRRSFTLGLTKGIMRNRITNVKVNNTYIDYEQDNRKPSNEVFVIYGGLTFTTFTYDTASRTYRVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8321; Mature: 8189
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMNIPRRSFTLGLTKGIMRNRITNVKVNNTYIDYEQDNRKPSNEVFVIYGGLTFTTFT CCCCCCCCCEEEEHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCEEEEECCEEEEEEE YDTASRTYRVN ECCCCEEEEEC >Mature Secondary Structure SKMNIPRRSFTLGLTKGIMRNRITNVKVNNTYIDYEQDNRKPSNEVFVIYGGLTFTTFT CCCCCCCCEEEEHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCEEEEECCEEEEEEE YDTASRTYRVN ECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA