Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041668

Identifier: 159041668

GI number: 159041668

Start: 1159797

End: 1162328

Strand: Reverse

Name: 159041668

Synonym: Cmaq_1102

Alternate gene names: NA

Gene position: 1162328-1159797 (Counterclockwise)

Preceding gene: 159041669

Following gene: 159041667

Centisome position: 55.95

GC content: 38.82

Gene sequence:

>2532_bases
ATGAGGAAACTATTACTAATATTAGTGCTTGCAATGGCTTCACTGGCTATTGTAGCTAATCCGCAGCTTAACCCGCCCGG
TGGCTTAACTAATGCAACCCACATAACCAACTACACTAAGCCCGTGCTCAACATTACTCTTAGTGTTAATTTAATCAGCT
TAACGTATGAGAATTGGGTTAAGTACCCGGTTAATAACGTGGTGTCAACCCCCTTAAACTACTTCACCCTGCTAATTAAC
GCATCAATAATTAATTCCACTGAACCCATTAATGAGAGTACAATGCTAAGTATTAGGATTGGCAACGTATACTCATACTC
AACTCTACTCAACCTCACTGCGGGTTCCTATCAATTAGTTAATGTACCAGTCTACTCACTACCATATGGTAACTACTCCA
TTAACGTTACCTTAAGTGTAATGAACTTCACAACAAGCAGATTCTATAACCTAATAATGTATAAACCAACAATAGTTAAC
GCATACTTGACTCAATGCGGCTTAACCACGTCACCCAGTAATAACTCTGAGGTAATTATACCTTACTCATCACCGATACT
AAACCTTATACTTTACTCAGCTGAACCTGTTAAATTAAACCTGGTTAGTAATATGGGTGGTGTTTACTCATCTTATAACG
TTACCATTAATGGTAAGTACGTGTTCCGGGAACCGTTAACATTCATGAATGGTACGGTTTCAGCTCAATTAGCATTCAAT
GGGCAGGCTTACTCCACGTATATGTTTCAGGTTAATTCAGTGAGACCATGGTACTCCATTAACGTTACCTATGGTTCAGC
ATCCTTAAGGGTTACTAACGGTTCAAGTATCCCCGTGGTAACTGGTCATAGCGTGAACTTCTATAGTTCATACTTAAGTA
ACTTAACCATGGAAACCATGATTAATAATCAAGTTACCGGTAATAGCTTCCTCATAGTTGACACTGGATCTTATAATGCT
CAAGTAGTATTCATGTACGGTAGTTGCACTGTTGGGTTGGTTAAATTCAGCATAAATGCGTATGAACCGGTACCATTGAT
TACATCACCTAACTCAACGGTGCCGCTTGGTGTTAATTCTAGGATCGTTTTTAATGTTAATGTACCAGCCCCAATAGTTA
ATGAGAAGGTGTACATCTCCCCATTATCACCCCAGTTCCCAGTAAGCATTACTGGTAGCCCAGTGGCCCTGAGGGGTAAT
GGAGGATTTGAAGTTGGTTTACTGGCGCTTCAACCCGGCCCAATGCCTTTAAACGTATCTCTAATCATGGTTGATTACGG
GGGATACTCATACTACTACAGCACCATAATTCTACTTAACGTACTCAAGCCAACCATGAGTATTACACCTGAGTTACTTA
ACATAACTTACGGGGAATTAGCCAGTATGCTAGTTAACTTAACAGCTGAGGGATACGGTATAGTTAATCAAACCCTTCAA
TACCAAGTAACCTTAAATGGGGTTAACGTTGCATTAGGCTCAATAACCACGAATTCAAGTGGTTACGCCTCATTAACATT
TAAGCCTAATGATACTGGTGTTTACGTAGTGTACGTAACATACTCCCCATCGCAATCATTCTCAATAACTAGCCAAGCTA
AGGTAATTGTTGCACCGGCTAAGGTCAATATAAGTTACTTAGTTAACTCAACCATAGTGTACGGGGATTCATTAACAGTA
ATGGTTAACTTAAATCCAGGAATCACAGCCTCAGTTTACCTATACTTAAATAAATCATTCATAGGTTACATTAATGTAAT
CAATGGTACAGGTTACACGCATGTGAAACCTAATGAGGCAGGTTACTTTAACTTAACAATATACTACCCAGGTTCCCGTA
ATTACTTACCATCAGTGGCTGAGGCATCACTAATGGTGTTGAAGGCTCCCTGCACAATTAGAATGAGTATTAATGGATCA
TTCATAGTGGGGAGTGAACTCTCAATAAGTGGTAATGTAACTGCACCAATTAGTCAAATACCAATCTACGTAAATAAGTC
ATTAATCATAGCCTATGTAACTAACGGTAAGTTTCAAGAATCATATAAACCACCTTACCCAGGATTATACAATATTACCG
TATACTGGCCCGGTAACAATAATTACCTATCATGTGGCCTCAATGAGTTTGTGAAGGTAATTAAGGCTAATCCAAGGGTA
TCAATTAGGGTACTTAATAATGGTACAATAGCCTCAGGCAGCTCAATAATAATGCTCATACTAATTAAGGTTAATAATAA
TTTACCAACAAGGGCTAATGCATCAATACTGGTTAATTCAAGTGGAAGAGTAAGAAGTATTAATACTGTGGTGAGTAATG
AAACGGTATTAAGGATAGTTACTGATAAGGCTGGGCCCTGGATTATTTACGTTAAGTACCTTGGGAATGAGTGGCTTAAT
GATGCTTACGTAGGCCCCATTGTGGTCTACGTTGTCTCAGGTGTGTTTGGAATCCCATGGTATATTTTCACAATATATGC
ATTAGCCATCATAATGGGTCTCATAATATCACTACTCATGCGCCATAGTTAA

Upstream 100 bases:

>100_bases
GGCTAAGGTAACTCAACAGGTTAATCAGGGAGGGCAAGCGGTTAATCAATGAGGTTTGAATAATGCTTAATAAGGATACC
CTTAACCCAATTCATTGAAT

Downstream 100 bases:

>100_bases
CAATGAATAAAGCCTATACCTCTTCATGGCTTTACCATGGGGTATGTTTAATAAATATGCCACTACTTTAGTTAGCTGTG
GATTATAAATCAATTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 843; Mature: 843

Protein sequence:

>843_residues
MRKLLLILVLAMASLAIVANPQLNPPGGLTNATHITNYTKPVLNITLSVNLISLTYENWVKYPVNNVVSTPLNYFTLLIN
ASIINSTEPINESTMLSIRIGNVYSYSTLLNLTAGSYQLVNVPVYSLPYGNYSINVTLSVMNFTTSRFYNLIMYKPTIVN
AYLTQCGLTTSPSNNSEVIIPYSSPILNLILYSAEPVKLNLVSNMGGVYSSYNVTINGKYVFREPLTFMNGTVSAQLAFN
GQAYSTYMFQVNSVRPWYSINVTYGSASLRVTNGSSIPVVTGHSVNFYSSYLSNLTMETMINNQVTGNSFLIVDTGSYNA
QVVFMYGSCTVGLVKFSINAYEPVPLITSPNSTVPLGVNSRIVFNVNVPAPIVNEKVYISPLSPQFPVSITGSPVALRGN
GGFEVGLLALQPGPMPLNVSLIMVDYGGYSYYYSTIILLNVLKPTMSITPELLNITYGELASMLVNLTAEGYGIVNQTLQ
YQVTLNGVNVALGSITTNSSGYASLTFKPNDTGVYVVYVTYSPSQSFSITSQAKVIVAPAKVNISYLVNSTIVYGDSLTV
MVNLNPGITASVYLYLNKSFIGYINVINGTGYTHVKPNEAGYFNLTIYYPGSRNYLPSVAEASLMVLKAPCTIRMSINGS
FIVGSELSISGNVTAPISQIPIYVNKSLIIAYVTNGKFQESYKPPYPGLYNITVYWPGNNNYLSCGLNEFVKVIKANPRV
SIRVLNNGTIASGSSIIMLILIKVNNNLPTRANASILVNSSGRVRSINTVVSNETVLRIVTDKAGPWIIYVKYLGNEWLN
DAYVGPIVVYVVSGVFGIPWYIFTIYALAIIMGLIISLLMRHS

Sequences:

>Translated_843_residues
MRKLLLILVLAMASLAIVANPQLNPPGGLTNATHITNYTKPVLNITLSVNLISLTYENWVKYPVNNVVSTPLNYFTLLIN
ASIINSTEPINESTMLSIRIGNVYSYSTLLNLTAGSYQLVNVPVYSLPYGNYSINVTLSVMNFTTSRFYNLIMYKPTIVN
AYLTQCGLTTSPSNNSEVIIPYSSPILNLILYSAEPVKLNLVSNMGGVYSSYNVTINGKYVFREPLTFMNGTVSAQLAFN
GQAYSTYMFQVNSVRPWYSINVTYGSASLRVTNGSSIPVVTGHSVNFYSSYLSNLTMETMINNQVTGNSFLIVDTGSYNA
QVVFMYGSCTVGLVKFSINAYEPVPLITSPNSTVPLGVNSRIVFNVNVPAPIVNEKVYISPLSPQFPVSITGSPVALRGN
GGFEVGLLALQPGPMPLNVSLIMVDYGGYSYYYSTIILLNVLKPTMSITPELLNITYGELASMLVNLTAEGYGIVNQTLQ
YQVTLNGVNVALGSITTNSSGYASLTFKPNDTGVYVVYVTYSPSQSFSITSQAKVIVAPAKVNISYLVNSTIVYGDSLTV
MVNLNPGITASVYLYLNKSFIGYINVINGTGYTHVKPNEAGYFNLTIYYPGSRNYLPSVAEASLMVLKAPCTIRMSINGS
FIVGSELSISGNVTAPISQIPIYVNKSLIIAYVTNGKFQESYKPPYPGLYNITVYWPGNNNYLSCGLNEFVKVIKANPRV
SIRVLNNGTIASGSSIIMLILIKVNNNLPTRANASILVNSSGRVRSINTVVSNETVLRIVTDKAGPWIIYVKYLGNEWLN
DAYVGPIVVYVVSGVFGIPWYIFTIYALAIIMGLIISLLMRHS
>Mature_843_residues
MRKLLLILVLAMASLAIVANPQLNPPGGLTNATHITNYTKPVLNITLSVNLISLTYENWVKYPVNNVVSTPLNYFTLLIN
ASIINSTEPINESTMLSIRIGNVYSYSTLLNLTAGSYQLVNVPVYSLPYGNYSINVTLSVMNFTTSRFYNLIMYKPTIVN
AYLTQCGLTTSPSNNSEVIIPYSSPILNLILYSAEPVKLNLVSNMGGVYSSYNVTINGKYVFREPLTFMNGTVSAQLAFN
GQAYSTYMFQVNSVRPWYSINVTYGSASLRVTNGSSIPVVTGHSVNFYSSYLSNLTMETMINNQVTGNSFLIVDTGSYNA
QVVFMYGSCTVGLVKFSINAYEPVPLITSPNSTVPLGVNSRIVFNVNVPAPIVNEKVYISPLSPQFPVSITGSPVALRGN
GGFEVGLLALQPGPMPLNVSLIMVDYGGYSYYYSTIILLNVLKPTMSITPELLNITYGELASMLVNLTAEGYGIVNQTLQ
YQVTLNGVNVALGSITTNSSGYASLTFKPNDTGVYVVYVTYSPSQSFSITSQAKVIVAPAKVNISYLVNSTIVYGDSLTV
MVNLNPGITASVYLYLNKSFIGYINVINGTGYTHVKPNEAGYFNLTIYYPGSRNYLPSVAEASLMVLKAPCTIRMSINGS
FIVGSELSISGNVTAPISQIPIYVNKSLIIAYVTNGKFQESYKPPYPGLYNITVYWPGNNNYLSCGLNEFVKVIKANPRV
SIRVLNNGTIASGSSIIMLILIKVNNNLPTRANASILVNSSGRVRSINTVVSNETVLRIVTDKAGPWIIYVKYLGNEWLN
DAYVGPIVVYVVSGVFGIPWYIFTIYALAIIMGLIISLLMRHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91851; Mature: 91851

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLLILVLAMASLAIVANPQLNPPGGLTNATHITNYTKPVLNITLSVNLISLTYENWV
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEECCCC
KYPVNNVVSTPLNYFTLLINASIINSTEPINESTMLSIRIGNVYSYSTLLNLTAGSYQLV
CCCCHHHHHCCHHEEEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEECCCCEEEE
NVPVYSLPYGNYSINVTLSVMNFTTSRFYNLIMYKPTIVNAYLTQCGLTTSPSNNSEVII
EEEEEEECCCCEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEE
PYSSPILNLILYSAEPVKLNLVSNMGGVYSSYNVTINGKYVFREPLTFMNGTVSAQLAFN
EECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEECEEEEECCCHHCCCCEEEEEEEC
GQAYSTYMFQVNSVRPWYSINVTYGSASLRVTNGSSIPVVTGHSVNFYSSYLSNLTMETM
CCEEEEEEEEEECCCCEEEEEEEECCEEEEEECCCCCEEEECCCCHHHHHHHHCCEEEHH
INNQVTGNSFLIVDTGSYNAQVVFMYGSCTVGLVKFSINAYEPVPLITSPNSTVPLGVNS
CCCEECCCEEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCEEEECCCC
RIVFNVNVPAPIVNEKVYISPLSPQFPVSITGSPVALRGNGGFEVGLLALQPGPMPLNVS
EEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCEEEEEEEECCCCCEEEEE
LIMVDYGGYSYYYSTIILLNVLKPTMSITPELLNITYGELASMLVNLTAEGYGIVNQTLQ
EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHHHHHEECCCCCEEECCEEE
YQVTLNGVNVALGSITTNSSGYASLTFKPNDTGVYVVYVTYSPSQSFSITSQAKVIVAPA
EEEEEECEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCCEEEEEEE
KVNISYLVNSTIVYGDSLTVMVNLNPGITASVYLYLNKSFIGYINVINGTGYTHVKPNEA
EEEEEEEEEEEEEECCEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCEEEECCCCC
GYFNLTIYYPGSRNYLPSVAEASLMVLKAPCTIRMSINGSFIVGSELSISGNVTAPISQI
CEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEECCEEEECCCCCCCHHHC
PIYVNKSLIIAYVTNGKFQESYKPPYPGLYNITVYWPGNNNYLSCGLNEFVKVIKANPRV
EEEEECEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHCCCCCE
SIRVLNNGTIASGSSIIMLILIKVNNNLPTRANASILVNSSGRVRSINTVVSNETVLRIV
EEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEE
TDKAGPWIIYVKYLGNEWLNDAYVGPIVVYVVSGVFGIPWYIFTIYALAIIMGLIISLLM
ECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RHS
HCC
>Mature Secondary Structure
MRKLLLILVLAMASLAIVANPQLNPPGGLTNATHITNYTKPVLNITLSVNLISLTYENWV
CHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEECCCC
KYPVNNVVSTPLNYFTLLINASIINSTEPINESTMLSIRIGNVYSYSTLLNLTAGSYQLV
CCCCHHHHHCCHHEEEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEECCCCEEEE
NVPVYSLPYGNYSINVTLSVMNFTTSRFYNLIMYKPTIVNAYLTQCGLTTSPSNNSEVII
EEEEEEECCCCEEEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEE
PYSSPILNLILYSAEPVKLNLVSNMGGVYSSYNVTINGKYVFREPLTFMNGTVSAQLAFN
EECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEECEEEEECCCHHCCCCEEEEEEEC
GQAYSTYMFQVNSVRPWYSINVTYGSASLRVTNGSSIPVVTGHSVNFYSSYLSNLTMETM
CCEEEEEEEEEECCCCEEEEEEEECCEEEEEECCCCCEEEECCCCHHHHHHHHCCEEEHH
INNQVTGNSFLIVDTGSYNAQVVFMYGSCTVGLVKFSINAYEPVPLITSPNSTVPLGVNS
CCCEECCCEEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCEEEECCCC
RIVFNVNVPAPIVNEKVYISPLSPQFPVSITGSPVALRGNGGFEVGLLALQPGPMPLNVS
EEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCEEEECCCCEEEEEEEECCCCCEEEEE
LIMVDYGGYSYYYSTIILLNVLKPTMSITPELLNITYGELASMLVNLTAEGYGIVNQTLQ
EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHHHHHEECCCCCEEECCEEE
YQVTLNGVNVALGSITTNSSGYASLTFKPNDTGVYVVYVTYSPSQSFSITSQAKVIVAPA
EEEEEECEEEEEEEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECCCEEEEEEE
KVNISYLVNSTIVYGDSLTVMVNLNPGITASVYLYLNKSFIGYINVINGTGYTHVKPNEA
EEEEEEEEEEEEEECCEEEEEEECCCCCEEEEEEEEECCEEEEEEEECCCCEEEECCCCC
GYFNLTIYYPGSRNYLPSVAEASLMVLKAPCTIRMSINGSFIVGSELSISGNVTAPISQI
CEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEECCEEEECCCCCCCHHHC
PIYVNKSLIIAYVTNGKFQESYKPPYPGLYNITVYWPGNNNYLSCGLNEFVKVIKANPRV
EEEEECEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHCCCCCE
SIRVLNNGTIASGSSIIMLILIKVNNNLPTRANASILVNSSGRVRSINTVVSNETVLRIV
EEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEE
TDKAGPWIIYVKYLGNEWLNDAYVGPIVVYVVSGVFGIPWYIFTIYALAIIMGLIISLLM
ECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RHS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA