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The map label for this gene is 159041571

Identifier: 159041571

GI number: 159041571

Start: 1054707

End: 1055984

Strand: Reverse

Name: 159041571

Synonym: Cmaq_1002

Alternate gene names: NA

Gene position: 1055984-1054707 (Counterclockwise)

Preceding gene: 159041572

Following gene: 159041570

Centisome position: 50.83

GC content: 41.24

Gene sequence:

>1278_bases
ATGGTAGGTAAGCTAACCTTACTCACGTTACTTGCACTGGCGTTAATAGTGCTGAGCTTACTTAACCTGTATAATGCATC
ATCAATAAGCTTAATTGAGCTTTACTCCAAGAGGGCTGTAGCCACCTTTAATGCCCTCCAAGACCACTACTACGTGAATT
CCCTAAATCTATATAAAGGCTCCACCTGTGGGGATTATAGTTGCCTTTGGACTTACTCACAGATTTTATCAGCATTAGTT
TACTTATCCCTAACACCTGGTTTAGGTAACTTCACGAATCTATTTAATCAATACTACTTAGGTTTAAGTCATTACTCTAA
TCCACTTAACCCATCATCAGGGTATGAGTCCGCTGTAACACCACCCATTGGTCCAGGTGGTGACACTTATTATGATGATA
ATGAGTGGGTTACGTTAGCATTAATAAAAATGTACCTGGCGACCAATAATACTAGGTACTTGAGGAGGGCTGAGGAGTTA
TTCAACTTCATAATCAGTGGGTGGAGTACCAATGAGTCATTAAGGTGCCCTGGTGGAATATACTGGAGGGTTGGTGACTT
ATCAAGGAACACTGTATCCAATTCCCCAGCCGCTGAGGCTGCTGCTGAATTATACCTAATAACCGGTAACCCAAGTTACT
TGAAGTGGGCTATTAGGATCCTTAACTGGGTTAATCAATGCTTAAGGTCACCTAGTGGACTATATTATGATCACATTAAC
CCAGATGGTACCATTGATGAAACAATATGGAGCTATAACCAAGGCACCACAGCCGCAGCGGCGGCATTAATATATGAAGC
AACCCATAATGAGTCATACCTGGTTCTAGCTGAAGACTCCGCATACGCATCCTTAAGCTACTTTAGCCAGGGAGCCATAT
ACTCGCAGCCGCCTGAATTCAATGCAATATACTTCAGAAGCCTTGAAAAGGTCATTGAGATAAGCCGTAATAACACGCTC
TCTAAAATGTACTGGAACCTACTCTTAACGTATGTTAATGATACGTGGATAACCTATAGGGATCCTGAAACTGGATTAAT
AACAATGGGTCAACCATTGAATTCAGTGAATCCTGATGATGCGGAAATATGGACTGCTGCAATGGTGCAGTTATACGCTA
TAATAGCTGGTTCACGGCAACCAATTGCATTTAAGGCACCTAGCATTAAACCAGGCACTGGACTTGTGCAGGTGCAATGG
CCTATAATCATTATAATCGTTATCGTATTAATAATTGTAATCACATATATTGCCTTGAGAATCAGAGAGAAGAGTTAA

Upstream 100 bases:

>100_bases
TACCGGTTTCTTAACTAATCCATCACATTAATTAACCCTTAATGAGAAGCATGATTTCTTACTAGTAAAACTTAATAAGT
ATACTTAATGATAATGAATC

Downstream 100 bases:

>100_bases
CTAGCCTCAACGCTTAGGTTTTGAGGAGTAAGGGTCATAATTATGGGATACTGCTTAAAAGCTGATAATAAGCGTAAATG
CAATGATATTAATTAAGCTG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Alpha-1 6-Mannanase; Hydrolase; Ricin B Lectin; Glycosyl Hydrolase Family; Glycosyl Hydrolase; Glycoside Hydrolase; Glycosylhydrolase; Alpha-L-Arabinofuranosidase B Family Protein; Glycoside Hydrolase Family Protein; Membrane Attached Hydrolase; Glysosyl Hydrolase Family

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MVGKLTLLTLLALALIVLSLLNLYNASSISLIELYSKRAVATFNALQDHYYVNSLNLYKGSTCGDYSCLWTYSQILSALV
YLSLTPGLGNFTNLFNQYYLGLSHYSNPLNPSSGYESAVTPPIGPGGDTYYDDNEWVTLALIKMYLATNNTRYLRRAEEL
FNFIISGWSTNESLRCPGGIYWRVGDLSRNTVSNSPAAEAAAELYLITGNPSYLKWAIRILNWVNQCLRSPSGLYYDHIN
PDGTIDETIWSYNQGTTAAAAALIYEATHNESYLVLAEDSAYASLSYFSQGAIYSQPPEFNAIYFRSLEKVIEISRNNTL
SKMYWNLLLTYVNDTWITYRDPETGLITMGQPLNSVNPDDAEIWTAAMVQLYAIIAGSRQPIAFKAPSIKPGTGLVQVQW
PIIIIIVIVLIIVITYIALRIREKS

Sequences:

>Translated_425_residues
MVGKLTLLTLLALALIVLSLLNLYNASSISLIELYSKRAVATFNALQDHYYVNSLNLYKGSTCGDYSCLWTYSQILSALV
YLSLTPGLGNFTNLFNQYYLGLSHYSNPLNPSSGYESAVTPPIGPGGDTYYDDNEWVTLALIKMYLATNNTRYLRRAEEL
FNFIISGWSTNESLRCPGGIYWRVGDLSRNTVSNSPAAEAAAELYLITGNPSYLKWAIRILNWVNQCLRSPSGLYYDHIN
PDGTIDETIWSYNQGTTAAAAALIYEATHNESYLVLAEDSAYASLSYFSQGAIYSQPPEFNAIYFRSLEKVIEISRNNTL
SKMYWNLLLTYVNDTWITYRDPETGLITMGQPLNSVNPDDAEIWTAAMVQLYAIIAGSRQPIAFKAPSIKPGTGLVQVQW
PIIIIIVIVLIIVITYIALRIREKS
>Mature_425_residues
MVGKLTLLTLLALALIVLSLLNLYNASSISLIELYSKRAVATFNALQDHYYVNSLNLYKGSTCGDYSCLWTYSQILSALV
YLSLTPGLGNFTNLFNQYYLGLSHYSNPLNPSSGYESAVTPPIGPGGDTYYDDNEWVTLALIKMYLATNNTRYLRRAEEL
FNFIISGWSTNESLRCPGGIYWRVGDLSRNTVSNSPAAEAAAELYLITGNPSYLKWAIRILNWVNQCLRSPSGLYYDHIN
PDGTIDETIWSYNQGTTAAAAALIYEATHNESYLVLAEDSAYASLSYFSQGAIYSQPPEFNAIYFRSLEKVIEISRNNTL
SKMYWNLLLTYVNDTWITYRDPETGLITMGQPLNSVNPDDAEIWTAAMVQLYAIIAGSRQPIAFKAPSIKPGTGLVQVQW
PIIIIIVIVLIIVITYIALRIREKS

Specific function: Unknown

COG id: COG4833

COG function: function code G; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322805, Length=198, Percent_Identity=27.2727272727273, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47506; Mature: 47506

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGKLTLLTLLALALIVLSLLNLYNASSISLIELYSKRAVATFNALQDHYYVNSLNLYKG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC
STCGDYSCLWTYSQILSALVYLSLTPGLGNFTNLFNQYYLGLSHYSNPLNPSSGYESAVT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PPIGPGGDTYYDDNEWVTLALIKMYLATNNTRYLRRAEELFNFIISGWSTNESLRCPGGI
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
YWRVGDLSRNTVSNSPAAEAAAELYLITGNPSYLKWAIRILNWVNQCLRSPSGLYYDHIN
EEEECCCCCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
PDGTIDETIWSYNQGTTAAAAALIYEATHNESYLVLAEDSAYASLSYFSQGAIYSQPPEF
CCCCHHHHHHCCCCCCHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCC
NAIYFRSLEKVIEISRNNTLSKMYWNLLLTYVNDTWITYRDPETGLITMGQPLNSVNPDD
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCEEEEECCCCCEEECCCCCCCCCCCH
AEIWTAAMVQLYAIIAGSRQPIAFKAPSIKPGTGLVQVQWPIIIIIVIVLIIVITYIALR
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
IREKS
HCCCC
>Mature Secondary Structure
MVGKLTLLTLLALALIVLSLLNLYNASSISLIELYSKRAVATFNALQDHYYVNSLNLYKG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC
STCGDYSCLWTYSQILSALVYLSLTPGLGNFTNLFNQYYLGLSHYSNPLNPSSGYESAVT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PPIGPGGDTYYDDNEWVTLALIKMYLATNNTRYLRRAEELFNFIISGWSTNESLRCPGGI
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
YWRVGDLSRNTVSNSPAAEAAAELYLITGNPSYLKWAIRILNWVNQCLRSPSGLYYDHIN
EEEECCCCCCCCCCCCHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
PDGTIDETIWSYNQGTTAAAAALIYEATHNESYLVLAEDSAYASLSYFSQGAIYSQPPEF
CCCCHHHHHHCCCCCCHHHHHHHHEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCC
NAIYFRSLEKVIEISRNNTLSKMYWNLLLTYVNDTWITYRDPETGLITMGQPLNSVNPDD
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCEEEEECCCCCEEECCCCCCCCCCCH
AEIWTAAMVQLYAIIAGSRQPIAFKAPSIKPGTGLVQVQWPIIIIIVIVLIIVITYIALR
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
IREKS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA