| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041464
Identifier: 159041464
GI number: 159041464
Start: 932239
End: 933795
Strand: Reverse
Name: 159041464
Synonym: Cmaq_0892
Alternate gene names: NA
Gene position: 933795-932239 (Counterclockwise)
Preceding gene: 159041466
Following gene: 159041463
Centisome position: 44.95
GC content: 41.68
Gene sequence:
>1557_bases GTGTCGTGGAAGGAGCTTAGGGATCCTATACATGGCTGGATTAGGTTAAGTATTGATGAGGCTAGGCTACTGGATGATGA TGTCTTTGTGCAGAGGCTTAGGAGAATAACGCAGGATGGTTTAGCTCATTACGTTTACCCATCAGCTAGGGGGAGTAGGT TTGAGCATAGTTTAGGCACGATGTACTTAGCCACATTAATGGTGGAAAGGGTGCTGAGTGAAGCTAATGAGCAGAGTCTT AGATCCTTAATGGATGCGCTTGGGCTTCATGATGAGGGAGTCAGCGCCATAAGGCAGTATGTTAGGTTAAGTGGACTGCA TCACGACATTGGTCACCCACCCTTATCCCACGTCCTAGATGGCTACGTATCATCATTAGTTAAGCCTAATCAGGTACTTT ACACTGCAGGGTTGGGGAAGGAACATGAGGTAGCTGGGTTAATGATAATGGGTTCAGGTAAATTCAGGAGAATAATTAGT AGCCTAGGTATTGATGCAGGCATCCTTAGGGTAATAACATTCTATAGGTTAATTAAAAGAGTAAGATTAATCACCCAATA CGGTTCAGTTAACTTAGAGGCAAGTATACCTGAAGTTAAATTGCTAAGCAATATGAGTGATGATGAGACCATGCTCCTGG AATCCCTTGCTTCAATAGTTTCAGGGGGTATAGATGCTGATAGGCTTGATTATACGCTTAGGGATCTTTACTTCACTGGT GCTGGGTCTGGGAGTGGGGCAATTGATATTGCAAGGCTAGTTAATTACCTGCATTTAGGCAGGGGGATTCTTATATTTGA TGATAAAGCAAAGGCATTCCTGGAGGGTTACGCAATAGCCAGGTATAATCTATATAAGTGGGTTTACATGCATCATAAGG TTCTTCAATACGATGAAATGCTAAGGGAGGTTTTCAGAAGCATAATAATGCTTGAGAAGGCTAAGGGTTTCAAGACCGCT GCAATCAACTTCCTTAACGGGAACCCCAATGAAGATGACCTAGACATATATACTGATGATTACTTAGAAGCCATGCTTAG TGAAGCTTACCATGAAGGGTTGATTAATGGTTACGTTAAGGATTATGCAGATTCAATACTACACAGGAGGACTAGTATGA GGGCTTTATGGAAGAGGGATGAGGATTACATAATGATTTTCGGCCTAGGTAACGCAATAATGCTTAATAAGTACATTGAT GAACAAGTAGGGGTACATGGGTTGAATTGGGTTAATGAATTCAAGACTAGGGTGGTTAATGAAATGAAGGAGACCCTTAA CTGTGATTGCAAGATACTGGTCTCCACAGCATCATTCAGTAATGATATAAGTACATTCGTTAGAAGTAACGATGGGTCAT TAATAACCATCACTGAAGTATCCCCCTTAATAAAGGCTATTGATAATGCATGGGAGCAAACCCCACACGTATTCGTATTC ATTGACCCAAGTGAATTAAGTAAGAACGGTGTAGAATTAAGTAAAGTAAGGAGCACTGCGGTAAGGCTTCTATCAAACAT GGCGACCACAGGATCAAGTCACCCTCACTACACTTAG
Upstream 100 bases:
>100_bases GTAACCCTGAGACTACAGCTAAAAGCCATGAGGAGTGCGTTAAATAGTAATGTAACTTTTAGGTACGGTTTATAAAAATT TGAAGGGAGGTATTAAATCA
Downstream 100 bases:
>100_bases ATAATGGCCCTTAAGTGAATTATTTGAATAATGGTTAAAAACACGGCCTACAATGGCTCAAGTGATTGCGGAAAATTACG TGAACGTGGGGAACTACAGG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSWKELRDPIHGWIRLSIDEARLLDDDVFVQRLRRITQDGLAHYVYPSARGSRFEHSLGTMYLATLMVERVLSEANEQSL RSLMDALGLHDEGVSAIRQYVRLSGLHHDIGHPPLSHVLDGYVSSLVKPNQVLYTAGLGKEHEVAGLMIMGSGKFRRIIS SLGIDAGILRVITFYRLIKRVRLITQYGSVNLEASIPEVKLLSNMSDDETMLLESLASIVSGGIDADRLDYTLRDLYFTG AGSGSGAIDIARLVNYLHLGRGILIFDDKAKAFLEGYAIARYNLYKWVYMHHKVLQYDEMLREVFRSIIMLEKAKGFKTA AINFLNGNPNEDDLDIYTDDYLEAMLSEAYHEGLINGYVKDYADSILHRRTSMRALWKRDEDYIMIFGLGNAIMLNKYID EQVGVHGLNWVNEFKTRVVNEMKETLNCDCKILVSTASFSNDISTFVRSNDGSLITITEVSPLIKAIDNAWEQTPHVFVF IDPSELSKNGVELSKVRSTAVRLLSNMATTGSSHPHYT
Sequences:
>Translated_518_residues MSWKELRDPIHGWIRLSIDEARLLDDDVFVQRLRRITQDGLAHYVYPSARGSRFEHSLGTMYLATLMVERVLSEANEQSL RSLMDALGLHDEGVSAIRQYVRLSGLHHDIGHPPLSHVLDGYVSSLVKPNQVLYTAGLGKEHEVAGLMIMGSGKFRRIIS SLGIDAGILRVITFYRLIKRVRLITQYGSVNLEASIPEVKLLSNMSDDETMLLESLASIVSGGIDADRLDYTLRDLYFTG AGSGSGAIDIARLVNYLHLGRGILIFDDKAKAFLEGYAIARYNLYKWVYMHHKVLQYDEMLREVFRSIIMLEKAKGFKTA AINFLNGNPNEDDLDIYTDDYLEAMLSEAYHEGLINGYVKDYADSILHRRTSMRALWKRDEDYIMIFGLGNAIMLNKYID EQVGVHGLNWVNEFKTRVVNEMKETLNCDCKILVSTASFSNDISTFVRSNDGSLITITEVSPLIKAIDNAWEQTPHVFVF IDPSELSKNGVELSKVRSTAVRLLSNMATTGSSHPHYT >Mature_517_residues SWKELRDPIHGWIRLSIDEARLLDDDVFVQRLRRITQDGLAHYVYPSARGSRFEHSLGTMYLATLMVERVLSEANEQSLR SLMDALGLHDEGVSAIRQYVRLSGLHHDIGHPPLSHVLDGYVSSLVKPNQVLYTAGLGKEHEVAGLMIMGSGKFRRIISS LGIDAGILRVITFYRLIKRVRLITQYGSVNLEASIPEVKLLSNMSDDETMLLESLASIVSGGIDADRLDYTLRDLYFTGA GSGSGAIDIARLVNYLHLGRGILIFDDKAKAFLEGYAIARYNLYKWVYMHHKVLQYDEMLREVFRSIIMLEKAKGFKTAA INFLNGNPNEDDLDIYTDDYLEAMLSEAYHEGLINGYVKDYADSILHRRTSMRALWKRDEDYIMIFGLGNAIMLNKYIDE QVGVHGLNWVNEFKTRVVNEMKETLNCDCKILVSTASFSNDISTFVRSNDGSLITITEVSPLIKAIDNAWEQTPHVFVFI DPSELSKNGVELSKVRSTAVRLLSNMATTGSSHPHYT
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=255, Percent_Identity=32.156862745098, Blast_Score=97, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17537827, Length=331, Percent_Identity=26.2839879154079, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537829, Length=331, Percent_Identity=26.2839879154079, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58460; Mature: 58329
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKELRDPIHGWIRLSIDEARLLDDDVFVQRLRRITQDGLAHYVYPSARGSRFEHSLGT CCHHHHHHHHCEEEEEEEHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHH MYLATLMVERVLSEANEQSLRSLMDALGLHDEGVSAIRQYVRLSGLHHDIGHPPLSHVLD HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH GYVSSLVKPNQVLYTAGLGKEHEVAGLMIMGSGKFRRIISSLGIDAGILRVITFYRLIKR HHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHH VRLITQYGSVNLEASIPEVKLLSNMSDDETMLLESLASIVSGGIDADRLDYTLRDLYFTG HHHHHHHCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEC AGSGSGAIDIARLVNYLHLGRGILIFDDKAKAFLEGYAIARYNLYKWVYMHHKVLQYDEM CCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREVFRSIIMLEKAKGFKTAAINFLNGNPNEDDLDIYTDDYLEAMLSEAYHEGLINGYVK HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH DYADSILHRRTSMRALWKRDEDYIMIFGLGNAIMLNKYIDEQVGVHGLNWVNEFKTRVVN HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMKETLNCDCKILVSTASFSNDISTFVRSNDGSLITITEVSPLIKAIDNAWEQTPHVFVF HHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEE IDPSELSKNGVELSKVRSTAVRLLSNMATTGSSHPHYT ECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SWKELRDPIHGWIRLSIDEARLLDDDVFVQRLRRITQDGLAHYVYPSARGSRFEHSLGT CHHHHHHHHCEEEEEEEHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHH MYLATLMVERVLSEANEQSLRSLMDALGLHDEGVSAIRQYVRLSGLHHDIGHPPLSHVLD HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH GYVSSLVKPNQVLYTAGLGKEHEVAGLMIMGSGKFRRIISSLGIDAGILRVITFYRLIKR HHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHH VRLITQYGSVNLEASIPEVKLLSNMSDDETMLLESLASIVSGGIDADRLDYTLRDLYFTG HHHHHHHCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEC AGSGSGAIDIARLVNYLHLGRGILIFDDKAKAFLEGYAIARYNLYKWVYMHHKVLQYDEM CCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREVFRSIIMLEKAKGFKTAAINFLNGNPNEDDLDIYTDDYLEAMLSEAYHEGLINGYVK HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH DYADSILHRRTSMRALWKRDEDYIMIFGLGNAIMLNKYIDEQVGVHGLNWVNEFKTRVVN HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMKETLNCDCKILVSTASFSNDISTFVRSNDGSLITITEVSPLIKAIDNAWEQTPHVFVF HHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEE IDPSELSKNGVELSKVRSTAVRLLSNMATTGSSHPHYT ECHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]