| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is 159041463
Identifier: 159041463
GI number: 159041463
Start: 931581
End: 932186
Strand: Reverse
Name: 159041463
Synonym: Cmaq_0891
Alternate gene names: NA
Gene position: 932186-931581 (Counterclockwise)
Preceding gene: 159041464
Following gene: 159041460
Centisome position: 44.87
GC content: 40.59
Gene sequence:
>606_bases ATGGCTCAAGTGATTGCGGAAAATTACGTGAACGTGGGGAACTACAGGGTAAGGTACTTGGAGAACGGGGATGGTGAGGT AGTGCTCATAATAGTGCCTCCACCTAATGCATCTGCGAATAGGTTCATGAATGTTATTAAAGGTGCAGCGGCGGCTGGAT TCAAGGTAATTCACGTGGACTTATCCTCAGCCCCAGCAAGTATGAGTAAAGCCAATAAGGTTGCCGCATTATCCTACATC ATTAATGCCCTTAATGGTAAGAGAATCATATTGGCTGGAGTTGGGCAAGGTGGAGGAATTGCCCTTGATTACGTAACTCA AACAAGGCAAAACACTATTTCCGGTATAGTGCTTGTTTCAACACCTAGGGTAATTAACCGCATTGATGAATTACCTAAAT TAAACATACCTATGCTTCTAATTTACAGTATTAATGATCCTAATGCACCTGTTGAGGAGGCTAATGCCGTTAAGTCGGTT ATTAAGAATTCTAGGTTAATGCTAATTAATAGTGATTGGTTAAGTGAATTAGATAAGGTTACTCAATTCATGGTCTCCTG GATGCTTGAATTAACTAAAAGCGACACTACTTCAAAAGGTTCCTAA
Upstream 100 bases:
>100_bases CTATCAAACATGGCGACCACAGGATCAAGTCACCCTCACTACACTTAGATAATGGCCCTTAAGTGAATTATTTGAATAAT GGTTAAAAACACGGCCTACA
Downstream 100 bases:
>100_bases TGGTGAAGTAGGATACTGTAACTAAGGCGATACCTATTAATACTGCTAATAGTAAGCTGTATTGAGTTAATGAATTCTCA TCAACAATTGAGCAATAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAQVIAENYVNVGNYRVRYLENGDGEVVLIIVPPPNASANRFMNVIKGAAAAGFKVIHVDLSSAPASMSKANKVAALSYI INALNGKRIILAGVGQGGGIALDYVTQTRQNTISGIVLVSTPRVINRIDELPKLNIPMLLIYSINDPNAPVEEANAVKSV IKNSRLMLINSDWLSELDKVTQFMVSWMLELTKSDTTSKGS
Sequences:
>Translated_201_residues MAQVIAENYVNVGNYRVRYLENGDGEVVLIIVPPPNASANRFMNVIKGAAAAGFKVIHVDLSSAPASMSKANKVAALSYI INALNGKRIILAGVGQGGGIALDYVTQTRQNTISGIVLVSTPRVINRIDELPKLNIPMLLIYSINDPNAPVEEANAVKSV IKNSRLMLINSDWLSELDKVTQFMVSWMLELTKSDTTSKGS >Mature_200_residues AQVIAENYVNVGNYRVRYLENGDGEVVLIIVPPPNASANRFMNVIKGAAAAGFKVIHVDLSSAPASMSKANKVAALSYII NALNGKRIILAGVGQGGGIALDYVTQTRQNTISGIVLVSTPRVINRIDELPKLNIPMLLIYSINDPNAPVEEANAVKSVI KNSRLMLINSDWLSELDKVTQFMVSWMLELTKSDTTSKGS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21698; Mature: 21567
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVIAENYVNVGNYRVRYLENGDGEVVLIIVPPPNASANRFMNVIKGAAAAGFKVIHVD CCCCHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEE LSSAPASMSKANKVAALSYIINALNGKRIILAGVGQGGGIALDYVTQTRQNTISGIVLVS CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHHHCCCCCCEEEEEE TPRVINRIDELPKLNIPMLLIYSINDPNAPVEEANAVKSVIKNSRLMLINSDWLSELDKV CCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHH TQFMVSWMLELTKSDTTSKGS HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AQVIAENYVNVGNYRVRYLENGDGEVVLIIVPPPNASANRFMNVIKGAAAAGFKVIHVD CCCHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEE LSSAPASMSKANKVAALSYIINALNGKRIILAGVGQGGGIALDYVTQTRQNTISGIVLVS CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHHHCCCCCCEEEEEE TPRVINRIDELPKLNIPMLLIYSINDPNAPVEEANAVKSVIKNSRLMLINSDWLSELDKV CCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHH TQFMVSWMLELTKSDTTSKGS HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA