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The map label for this gene is yicO [C]

Identifier: 159041440

GI number: 159041440

Start: 911380

End: 912831

Strand: Reverse

Name: yicO [C]

Synonym: Cmaq_0867

Alternate gene names: 159041440

Gene position: 912831-911380 (Counterclockwise)

Preceding gene: 159041441

Following gene: 159041439

Centisome position: 43.94

GC content: 42.08

Gene sequence:

>1452_bases
GTGAGCTTAAGATACTTCAATATAACTGAAAGGGGGAGTAATGTTAGGAGGGAGGTTTTAGCTGGGTTAACAACGTTTCT
ATCAATGGCATACATACTTATTGTTAACCCATCAATATTAACAGCAGGCTTCGAGATTGCGTTAAGTGCCGCAACCCACA
CCTCAGTATCAGTTGTTGAGGCAACTTACGCTGGTTTAATATTTAATGTTAAGTTAAGCTTCACGGTGGCGACAGCCTTA
GCGGCGGCTATAGCTACGTTAATCATGGGGCTTTACGCCAACATGCCCTTTGGCCTGGCTCCAGGCATGGGTGAGAACTC
TTTCATAGCGTTCTCAGTAATACCACTATTCACTGAAATACTGGTTAATAGGGGGCATGTGGTGGGCGTTAACGCTGCGC
TCCTAGGGGTATACTTAGCGTTAATCTCTGTTCTCTTCAATGGGATTCTATTCCTAGTATTCTCTATTGGTAAACTTAGG
GAAGCCATAATAAATTCTATTCCTGAGAGGCTTAGATTAGGTATAGCGATAGGGATTGGCTTATTCATAGCTTTCATAGG
CTTCTCATCAGCTGGAATAGTAACTGCAGGGATACCTGGTGCAACACCTGTACAGTTGAACACGAAGGCTTTTTCACAGT
TACCGCTATACCTGGCTTTAGTAGGTTTCATATTAGCCGCCACCCTATATGCTCTAAGGGTTACTGGGAGTTTCCTAATC
TCAATAGTGGTGATATCTATAGTGGGTGCTGCCTTAGGCTACATTAGGCCTGAGGCTTTTTTAATAACTAAAATGCCTTT
AACAACCTCGATAATCAATGGTATTCCTAACTCATTTTACCTATACTTCTCATTATTCGGCTTAGGCTTTCCCATAGCCT
TCTCATTATTCATAGTGGACTTCTTCGACGGCATAGGTACCATAACTGGGCTTTCTATTAAGGCTAACTTAGTTAAGGAT
GGGAGAATAGTAAACATTAATAGGGCATTAGTAAGTGATTCACTGGCGTCGATAATTGCACCATTCATAGGTACATCAAC
CACAGTAGTTTATATTGAAAGCTCAACGGGCATAGAATCTGGTGGTAGAACTGGGTTAACTGCACTTACCACGGCCTTAA
TGCTACTGGTTTCAATACCATTCGCACCACTTATCGCATCAATACCCTCCTTTGCAACCGCAGGGGTACTGATAATGGTG
GGTTTACTGTTCCTCTCAATGGCCTCTGACCTTAAGTTGAGTGACGACTTAAGTGAAGTTATACCGGCTTTCCTAGCTAT
AATATCAATACCCTTCACCTACAGTATAACTACAGGCATTGGTTTAGCTATCTTGACTTACGTGGCATTAAAGATACTGA
TGGGTAAGTATAGGGAAGTTACATGGGGCATGTGGCTTGTAGCTGCATTATTCATAGTGTACTTTACATTAGTGGCAACC
ATTGGTGTTTAA

Upstream 100 bases:

>100_bases
TCTCAAGGTTTTATGCATTTAATTTAAGTTTAGTCAAGTATTAAGTAGCATAATGGTTCATTTAGGGAGAATTTAAAAAA
CGCATCAATAACGCCTCAAC

Downstream 100 bases:

>100_bases
ATCCTTAAATAATAACCATAAGCCTCACCTCCTCAGACCTAAGACAGTGATTCATAAGTATACAGTATGCGTAAGCTTCC
TCATAATGCAGATTAACAGA

Product: xanthine/uracil/vitamin C permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSLRYFNITERGSNVRREVLAGLTTFLSMAYILIVNPSILTAGFEIALSAATHTSVSVVEATYAGLIFNVKLSFTVATAL
AAAIATLIMGLYANMPFGLAPGMGENSFIAFSVIPLFTEILVNRGHVVGVNAALLGVYLALISVLFNGILFLVFSIGKLR
EAIINSIPERLRLGIAIGIGLFIAFIGFSSAGIVTAGIPGATPVQLNTKAFSQLPLYLALVGFILAATLYALRVTGSFLI
SIVVISIVGAALGYIRPEAFLITKMPLTTSIINGIPNSFYLYFSLFGLGFPIAFSLFIVDFFDGIGTITGLSIKANLVKD
GRIVNINRALVSDSLASIIAPFIGTSTTVVYIESSTGIESGGRTGLTALTTALMLLVSIPFAPLIASIPSFATAGVLIMV
GLLFLSMASDLKLSDDLSEVIPAFLAIISIPFTYSITTGIGLAILTYVALKILMGKYREVTWGMWLVAALFIVYFTLVAT
IGV

Sequences:

>Translated_483_residues
MSLRYFNITERGSNVRREVLAGLTTFLSMAYILIVNPSILTAGFEIALSAATHTSVSVVEATYAGLIFNVKLSFTVATAL
AAAIATLIMGLYANMPFGLAPGMGENSFIAFSVIPLFTEILVNRGHVVGVNAALLGVYLALISVLFNGILFLVFSIGKLR
EAIINSIPERLRLGIAIGIGLFIAFIGFSSAGIVTAGIPGATPVQLNTKAFSQLPLYLALVGFILAATLYALRVTGSFLI
SIVVISIVGAALGYIRPEAFLITKMPLTTSIINGIPNSFYLYFSLFGLGFPIAFSLFIVDFFDGIGTITGLSIKANLVKD
GRIVNINRALVSDSLASIIAPFIGTSTTVVYIESSTGIESGGRTGLTALTTALMLLVSIPFAPLIASIPSFATAGVLIMV
GLLFLSMASDLKLSDDLSEVIPAFLAIISIPFTYSITTGIGLAILTYVALKILMGKYREVTWGMWLVAALFIVYFTLVAT
IGV
>Mature_482_residues
SLRYFNITERGSNVRREVLAGLTTFLSMAYILIVNPSILTAGFEIALSAATHTSVSVVEATYAGLIFNVKLSFTVATALA
AAIATLIMGLYANMPFGLAPGMGENSFIAFSVIPLFTEILVNRGHVVGVNAALLGVYLALISVLFNGILFLVFSIGKLRE
AIINSIPERLRLGIAIGIGLFIAFIGFSSAGIVTAGIPGATPVQLNTKAFSQLPLYLALVGFILAATLYALRVTGSFLIS
IVVISIVGAALGYIRPEAFLITKMPLTTSIINGIPNSFYLYFSLFGLGFPIAFSLFIVDFFDGIGTITGLSIKANLVKDG
RIVNINRALVSDSLASIIAPFIGTSTTVVYIESSTGIESGGRTGLTALTTALMLLVSIPFAPLIASIPSFATAGVLIMVG
LLFLSMASDLKLSDDLSEVIPAFLAIISIPFTYSITTGIGLAILTYVALKILMGKYREVTWGMWLVAALFIVYFTLVATI
GV

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=476, Percent_Identity=34.453781512605, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1790150, Length=473, Percent_Identity=34.0380549682875, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI1790499, Length=476, Percent_Identity=31.9327731092437, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI48994909, Length=482, Percent_Identity=32.1576763485477, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 51044; Mature: 50912

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRYFNITERGSNVRREVLAGLTTFLSMAYILIVNPSILTAGFEIALSAATHTSVSVVE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEEEHHCCCHHHHHH
ATYAGLIFNVKLSFTVATALAAAIATLIMGLYANMPFGLAPGMGENSFIAFSVIPLFTEI
HHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHH
LVNRGHVVGVNAALLGVYLALISVLFNGILFLVFSIGKLREAIINSIPERLRLGIAIGIG
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIAFIGFSSAGIVTAGIPGATPVQLNTKAFSQLPLYLALVGFILAATLYALRVTGSFLI
HHHHHHHCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVVISIVGAALGYIRPEAFLITKMPLTTSIINGIPNSFYLYFSLFGLGFPIAFSLFIVD
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
FFDGIGTITGLSIKANLVKDGRIVNINRALVSDSLASIIAPFIGTSTTVVYIESSTGIES
HHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
GGRTGLTALTTALMLLVSIPFAPLIASIPSFATAGVLIMVGLLFLSMASDLKLSDDLSEV
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IPAFLAIISIPFTYSITTGIGLAILTYVALKILMGKYREVTWGMWLVAALFIVYFTLVAT
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGV
HCC
>Mature Secondary Structure 
SLRYFNITERGSNVRREVLAGLTTFLSMAYILIVNPSILTAGFEIALSAATHTSVSVVE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEEEHHCCCHHHHHH
ATYAGLIFNVKLSFTVATALAAAIATLIMGLYANMPFGLAPGMGENSFIAFSVIPLFTEI
HHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHH
LVNRGHVVGVNAALLGVYLALISVLFNGILFLVFSIGKLREAIINSIPERLRLGIAIGIG
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIAFIGFSSAGIVTAGIPGATPVQLNTKAFSQLPLYLALVGFILAATLYALRVTGSFLI
HHHHHHHCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIVVISIVGAALGYIRPEAFLITKMPLTTSIINGIPNSFYLYFSLFGLGFPIAFSLFIVD
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
FFDGIGTITGLSIKANLVKDGRIVNINRALVSDSLASIIAPFIGTSTTVVYIESSTGIES
HHHHHHHHCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
GGRTGLTALTTALMLLVSIPFAPLIASIPSFATAGVLIMVGLLFLSMASDLKLSDDLSEV
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IPAFLAIISIPFTYSITTGIGLAILTYVALKILMGKYREVTWGMWLVAALFIVYFTLVAT
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]