Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041397

Identifier: 159041397

GI number: 159041397

Start: 866632

End: 867060

Strand: Reverse

Name: 159041397

Synonym: Cmaq_0824

Alternate gene names: NA

Gene position: 867060-866632 (Counterclockwise)

Preceding gene: 159041399

Following gene: 159041396

Centisome position: 41.73

GC content: 44.06

Gene sequence:

>429_bases
GTGGGTAAGTTCACGTGCCTTCACTGCGACAACTGCTGCTTCTTTGAACGTGAGGAGCAGGGACCCTTAGTGTTCAGTGA
TGAGGTTAAGAGACTTAGGAGATTAGCTAAAGAAAGGGGGGTTGAGTTAACCTTCAGGGAGATTAAGGTTAATGGGGTTA
CAATGTATAGGTGGATCATATTGGGTTACTGCCCATTCTATGATAAGGATAATAAACTATGCACAATACATTCGGTTAAG
CCACTTGCCTGCAAAATGTATCCACTATTGTTTAACCCAAGGACTGGTGAAGTGTTGGTGTCTAAGGATTGCCCATGGGT
TGAGGAGACTGTTAAGAACGGTGGCATTAACCTAAGTGACTTCCCTGAGGAGGCTAAGGCGCTTCATAGGGTTGTGATTA
GGCTTAGTAAGGGTAGTTCAAATGGTTAA

Upstream 100 bases:

>100_bases
AGTTAAATTAAAGCCTATTTTAAACTCTTCCCGTTATTTTCAGGGTAGTACCGGTTCCCTAGTGTGAATTACTTATTAAG
GGAAGCTGCATGAGCGTAAT

Downstream 100 bases:

>100_bases
TTTAATCTTGTGGAAAAGTTTAAAACGAGATACGCAAATGGTAGTTAGCTATGTCTTACACAATGACATCTAAGCCTATG
ACGTATGTGCTTTGGGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVK
PLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG

Sequences:

>Translated_142_residues
MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVK
PLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG
>Mature_141_residues
GKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWIILGYCPFYDKDNKLCTIHSVKP
LACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSDFPEEAKALHRVVIRLSKGSSNG

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16321; Mature: 16190

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWII
CCCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEH
LGYCPFYDKDNKLCTIHSVKPLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSD
HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCC
FPEEAKALHRVVIRLSKGSSNG
CCHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure 
GKFTCLHCDNCCFFEREEQGPLVFSDEVKRLRRLAKERGVELTFREIKVNGVTMYRWII
CCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEH
LGYCPFYDKDNKLCTIHSVKPLACKMYPLLFNPRTGEVLVSKDCPWVEETVKNGGINLSD
HHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCC
FPEEAKALHRVVIRLSKGSSNG
CCHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA