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The map label for this gene is 159041387

Identifier: 159041387

GI number: 159041387

Start: 853625

End: 854320

Strand: Reverse

Name: 159041387

Synonym: Cmaq_0814

Alternate gene names: NA

Gene position: 854320-853625 (Counterclockwise)

Preceding gene: 159041388

Following gene: 159041382

Centisome position: 41.12

GC content: 44.97

Gene sequence:

>696_bases
GTGAGTATTAATGCACATTACCATGATTTACTCAGGAACCTAATTAATTGCAACTACTGCGAAAGGTTAGTAAGGTATAG
GGTAACCGTGCCACCGTTACCTAGGTTTAGTAATGATGAATACTGGAGGAAACCAGTACCACCTTGGGGAGACTTGAGTA
ACCCAAGAATCATGATAGTGGGGTTAGCACCAGCCGCCCATGGTGGCAATAGGACGGGTAGAATGTTCACCGGTGATGCG
AGCGCCCAATTCCTTTTCAAGGCTCTTCACGCATGTGGATTATCAAATAACCCATATAGCCTTAGTAGGATTGACGGCAC
TAAGGTTAACTGTGTTTACATTACGTCAGTCGTTAAGTGTGCACCACCGGATAATAAACCAACTCCAGGTGAGGTTAAGG
CTTGTGTAGGCAGGTGGTTTATTAATGAAATAAATATGGTTAAGCCTAGGGCGATAGTGGTGCTTGGTGAAGTTGCATGG
AGGGGAGTGGCCATGGCTCTTGGGCTACGTGGAGGCTTTAAGCATGGGGGTGTAGTTAAGATTAACGATACTGCAGTATA
CATGAGTTATCACCCAAGTCCAAGGAATACTAATACTGGTAGGTTAAGATTAAGTGACCTAGTTAACATACTATGTGCAG
CCGCTAAATACGCTGGTTGCCCTACTCCTCAACTTCAAGGAAACCCTCAGGCGTAA

Upstream 100 bases:

>100_bases
TGTAAGGAAGTTAGCGCACATAATAAAACCAGTACCCTTAAATCCACTGGTCTTGATGAGTGGCTTAAGTAGGTTAAATT
TAATTTGAGGTGAGTGGGGA

Downstream 100 bases:

>100_bases
CGTTAATCTTATACGTCTTTAAAGGAACCTTAACCTGCATGTATTCGCAGGGAACCTCAGGCCTAACTACAGGTTTCTCA
ATTAATTCACCAGTCCTAAC

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSINAHYHDLLRNLINCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIVGLAPAAHGGNRTGRMFTGDA
SAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKCAPPDNKPTPGEVKACVGRWFINEINMVKPRAIVVLGEVAW
RGVAMALGLRGGFKHGGVVKINDTAVYMSYHPSPRNTNTGRLRLSDLVNILCAAAKYAGCPTPQLQGNPQA

Sequences:

>Translated_231_residues
MSINAHYHDLLRNLINCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIVGLAPAAHGGNRTGRMFTGDA
SAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKCAPPDNKPTPGEVKACVGRWFINEINMVKPRAIVVLGEVAW
RGVAMALGLRGGFKHGGVVKINDTAVYMSYHPSPRNTNTGRLRLSDLVNILCAAAKYAGCPTPQLQGNPQA
>Mature_230_residues
SINAHYHDLLRNLINCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIVGLAPAAHGGNRTGRMFTGDAS
AQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKCAPPDNKPTPGEVKACVGRWFINEINMVKPRAIVVLGEVAWR
GVAMALGLRGGFKHGGVVKINDTAVYMSYHPSPRNTNTGRLRLSDLVNILCAAAKYAGCPTPQLQGNPQA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 25374; Mature: 25242

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINAHYHDLLRNLINCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIV
CCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GLAPAAHGGNRTGRMFTGDASAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKC
ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEEE
APPDNKPTPGEVKACVGRWFINEINMVKPRAIVVLGEVAWRGVAMALGLRGGFKHGGVVK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCEEE
INDTAVYMSYHPSPRNTNTGRLRLSDLVNILCAAAKYAGCPTPQLQGNPQA
ECCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SINAHYHDLLRNLINCNYCERLVRYRVTVPPLPRFSNDEYWRKPVPPWGDLSNPRIMIV
CCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GLAPAAHGGNRTGRMFTGDASAQFLFKALHACGLSNNPYSLSRIDGTKVNCVYITSVVKC
ECCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEEE
APPDNKPTPGEVKACVGRWFINEINMVKPRAIVVLGEVAWRGVAMALGLRGGFKHGGVVK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCEEE
INDTAVYMSYHPSPRNTNTGRLRLSDLVNILCAAAKYAGCPTPQLQGNPQA
ECCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]