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The map label for this gene is rps25e [H]

Identifier: 159041363

GI number: 159041363

Start: 824767

End: 825123

Strand: Reverse

Name: rps25e [H]

Synonym: Cmaq_0790

Alternate gene names: 159041363

Gene position: 825123-824767 (Counterclockwise)

Preceding gene: 159041367

Following gene: 159041361

Centisome position: 39.72

GC content: 41.18

Gene sequence:

>357_bases
ATGGGAGGTAAGAAGAAGCCTACTATTTCACAATTAGCTAAAAAGGAGAGCAAGGAAAAGGAGCAGACTGAGAAGAAGGG
TAAGGGGAAGGGTAAGGCTGCTGAGGAGCCTGTTAAGAAGATTGTAGCCACAGTACCCGCTGAATTATATGACCAGATAG
CTAAGGATGTTCAGAAGATGGAATACGTAACAACATACCTAATATCCTCGAAGTATGGGCTTAAAATGGGGGCTGCATCA
AGGGTGCTTAATGATTTAGTGAAGAGGGGTGAATTAGTATTGGTGTCAAGGAGCCATAGAATGAATGTTTATACTCCTGT
TGATAGGGCTAAGAAACTTGGTTTAATTAATCAGTAA

Upstream 100 bases:

>100_bases
CACTGCTGCAAAGAGGGTTATCTGCCTCTTCATAGAGGTTAGTCTTTACGCCTCCTTAACTCCCATTAAGTTTATAAAGC
CTAATCCCATCAACTTAAGT

Downstream 100 bases:

>100_bases
CTAAAAATACATATGGGTTTAATTTATCAAAATACCATTAATGCTTTTATGGAACCTTGTACTTACCTTCAGCAACCTTC
TGAACCCTACCCTCCTTAGC

Product: 30S ribosomal protein S25e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGGKKKPTISQLAKKESKEKEQTEKKGKGKGKAAEEPVKKIVATVPAELYDQIAKDVQKMEYVTTYLISSKYGLKMGAAS
RVLNDLVKRGELVLVSRSHRMNVYTPVDRAKKLGLINQ

Sequences:

>Translated_118_residues
MGGKKKPTISQLAKKESKEKEQTEKKGKGKGKAAEEPVKKIVATVPAELYDQIAKDVQKMEYVTTYLISSKYGLKMGAAS
RVLNDLVKRGELVLVSRSHRMNVYTPVDRAKKLGLINQ
>Mature_117_residues
GGKKKPTISQLAKKESKEKEQTEKKGKGKGKAAEEPVKKIVATVPAELYDQIAKDVQKMEYVTTYLISSKYGLKMGAASR
VLNDLVKRGELVLVSRSHRMNVYTPVDRAKKLGLINQ

Specific function: Unknown

COG id: COG4901

COG function: function code J; Ribosomal protein S25

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S25e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004977
- ProDom:   PD012268 [H]

Pfam domain/function: PF03297 Ribosomal_S25 [H]

EC number: NA

Molecular weight: Translated: 13120; Mature: 12988

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKKKPTISQLAKKESKEKEQTEKKGKGKGKAAEEPVKKIVATVPAELYDQIAKDVQKM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYVTTYLISSKYGLKMGAASRVLNDLVKRGELVLVSRSHRMNVYTPVDRAKKLGLINQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
GGKKKPTISQLAKKESKEKEQTEKKGKGKGKAAEEPVKKIVATVPAELYDQIAKDVQKM
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
EYVTTYLISSKYGLKMGAASRVLNDLVKRGELVLVSRSHRMNVYTPVDRAKKLGLINQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792869 [H]