| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is nanT [C]
Identifier: 159041333
GI number: 159041333
Start: 789603
End: 790814
Strand: Reverse
Name: nanT [C]
Synonym: Cmaq_0759
Alternate gene names: 159041333
Gene position: 790814-789603 (Counterclockwise)
Preceding gene: 159041343
Following gene: 159041331
Centisome position: 38.06
GC content: 43.73
Gene sequence:
>1212_bases ATGAGTAATTTAAGGGAGATTGATTATGGGCCATTAGGGAGGAGTAGGTTCTTCGCCATAACATCAACGGCACTGGGCAT GTTCCTATGGGGTTTCATACTGGCATTAGCCCCATTAACAACGCAATGGCCCTTCGTACCAAGTAGTTTTGATGAGTACG TACTCTTAGCGGCGCCAGTATCATTAATGGTTGGTAATTTAATCATCGGGAAATTATCTGACGCCTTGGGTAGGAAGATG GGTTTCATAATGACCATGGTTATTTACGGTGTTGGTGCATTACTAATAATATTATCCAGTAACGTTTACGAATTAATAGC CGGCATAGCTCTAGCTGAATTTGGTCTTGGTGGTGAGGAGCCTGCAACGTTAGCCTATATGGCTGAAATGATGCCCATTA GGTTGAGGGAGAGGATCATCATAGGTGTTACTAATGTGGCTAATATTGGTGCCGCGGTGGCGGCTGCATTGTCCCTTGTT GCTTCATCAATGTACCTTCAGAAGCTGTTCTTTGGTGTAACAATACTAGTCACCATAATTATAATATTAGCCACTAGGCT GCTGATACCTGAATCATATAGGTGGAGTAACGTGAAGTCGTCATGTAGGGTGATTGGGTTAAGTGAGATGAAGGGATTTA GGATTAGGTTAATATTCTTAACACTCATAGCCTTAACAATAGTGTTAACATATGCATTACTGGCTCTCGTAATGGGTCCT TACCTCTTTCCGAAATTAACCTCATGGATCGTGCTACTGTATAATGTTGGTGAATCAGTGGGTGGCTTAATAGGCATGGC CTTAGCTGATATAATGGGTATGAGGAAGTTCACCCTAATGGCCTACCTAGGTGGTTTCATCACAATGCTACTGGTTATAC CTCAATTAGCCTTTGCACCGCAAAACCTACCACTATTCCTTCTAATACTATCTGTTAACGGCGTATTTGGTGAACTGGGG TGGGCCGCTAGGGTTGTACTGGAGCCTGAGTTATTTCCAACAGGCAGTAGATCCATGGGTGTTGCCTTGGTTAGGGCAAT AGCCTACGTCGCCTACATAGCATCAATCTTCATAACAGCTGGTTTCACAATATGGCAATACGCATGGTATAATGTCGCAC TATGGAGCCTTGGGCTATTAGGTGCATTGATTTGGTTTACCCATGGTGTTGAAACCAGGCTTAAGACCCTGGAGGAGGTT AATCCGCAGTGA
Upstream 100 bases:
>100_bases AGTGATGCCTAACTCATGCTCGGTATACCTCATTTTCCTAATCAATGTATAGATTGAGTAAGCGCATAAAATTTATAAAT TGGTTATTGGTTACCAATTC
Downstream 100 bases:
>100_bases ATTGAAGCAACACTATCACTGATTATTAAACATGGATTTTAATAATGCCTTAGCCTTCCTTAATGTTCTACCATAATGGT GACTGCACCGTTAGTATTAA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: Sugar Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Metabolite Transporter; Sugar Transport Related Membrane Protein; Transport Membrane Protein Related Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSNLREIDYGPLGRSRFFAITSTALGMFLWGFILALAPLTTQWPFVPSSFDEYVLLAAPVSLMVGNLIIGKLSDALGRKM GFIMTMVIYGVGALLIILSSNVYELIAGIALAEFGLGGEEPATLAYMAEMMPIRLRERIIIGVTNVANIGAAVAAALSLV ASSMYLQKLFFGVTILVTIIIILATRLLIPESYRWSNVKSSCRVIGLSEMKGFRIRLIFLTLIALTIVLTYALLALVMGP YLFPKLTSWIVLLYNVGESVGGLIGMALADIMGMRKFTLMAYLGGFITMLLVIPQLAFAPQNLPLFLLILSVNGVFGELG WAARVVLEPELFPTGSRSMGVALVRAIAYVAYIASIFITAGFTIWQYAWYNVALWSLGLLGALIWFTHGVETRLKTLEEV NPQ
Sequences:
>Translated_403_residues MSNLREIDYGPLGRSRFFAITSTALGMFLWGFILALAPLTTQWPFVPSSFDEYVLLAAPVSLMVGNLIIGKLSDALGRKM GFIMTMVIYGVGALLIILSSNVYELIAGIALAEFGLGGEEPATLAYMAEMMPIRLRERIIIGVTNVANIGAAVAAALSLV ASSMYLQKLFFGVTILVTIIIILATRLLIPESYRWSNVKSSCRVIGLSEMKGFRIRLIFLTLIALTIVLTYALLALVMGP YLFPKLTSWIVLLYNVGESVGGLIGMALADIMGMRKFTLMAYLGGFITMLLVIPQLAFAPQNLPLFLLILSVNGVFGELG WAARVVLEPELFPTGSRSMGVALVRAIAYVAYIASIFITAGFTIWQYAWYNVALWSLGLLGALIWFTHGVETRLKTLEEV NPQ >Mature_402_residues SNLREIDYGPLGRSRFFAITSTALGMFLWGFILALAPLTTQWPFVPSSFDEYVLLAAPVSLMVGNLIIGKLSDALGRKMG FIMTMVIYGVGALLIILSSNVYELIAGIALAEFGLGGEEPATLAYMAEMMPIRLRERIIIGVTNVANIGAAVAAALSLVA SSMYLQKLFFGVTILVTIIIILATRLLIPESYRWSNVKSSCRVIGLSEMKGFRIRLIFLTLIALTIVLTYALLALVMGPY LFPKLTSWIVLLYNVGESVGGLIGMALADIMGMRKFTLMAYLGGFITMLLVIPQLAFAPQNLPLFLLILSVNGVFGELGW AARVVLEPELFPTGSRSMGVALVRAIAYVAYIASIFITAGFTIWQYAWYNVALWSLGLLGALIWFTHGVETRLKTLEEVN PQ
Specific function: May Be A Sugar-Cation Symporter Involved In Sialic Acid Transport As It Is Required For Sialic Acid Uptake. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44020; Mature: 43888
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLREIDYGPLGRSRFFAITSTALGMFLWGFILALAPLTTQWPFVPSSFDEYVLLAAPV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SLMVGNLIIGKLSDALGRKMGFIMTMVIYGVGALLIILSSNVYELIAGIALAEFGLGGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC PATLAYMAEMMPIRLRERIIIGVTNVANIGAAVAAALSLVASSMYLQKLFFGVTILVTII CHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILATRLLIPESYRWSNVKSSCRVIGLSEMKGFRIRLIFLTLIALTIVLTYALLALVMGP HHHHHHHHCCCCCCCCCHHCHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH YLFPKLTSWIVLLYNVGESVGGLIGMALADIMGMRKFTLMAYLGGFITMLLVIPQLAFAP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNLPLFLLILSVNGVFGELGWAARVVLEPELFPTGSRSMGVALVRAIAYVAYIASIFITA CCCCCEEHEEHHCCHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GFTIWQYAWYNVALWSLGLLGALIWFTHGVETRLKTLEEVNPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure SNLREIDYGPLGRSRFFAITSTALGMFLWGFILALAPLTTQWPFVPSSFDEYVLLAAPV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH SLMVGNLIIGKLSDALGRKMGFIMTMVIYGVGALLIILSSNVYELIAGIALAEFGLGGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC PATLAYMAEMMPIRLRERIIIGVTNVANIGAAVAAALSLVASSMYLQKLFFGVTILVTII CHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILATRLLIPESYRWSNVKSSCRVIGLSEMKGFRIRLIFLTLIALTIVLTYALLALVMGP HHHHHHHHCCCCCCCCCHHCHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH YLFPKLTSWIVLLYNVGESVGGLIGMALADIMGMRKFTLMAYLGGFITMLLVIPQLAFAP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNLPLFLLILSVNGVFGELGWAARVVLEPELFPTGSRSMGVALVRAIAYVAYIASIFITA CCCCCEEHEEHHCCHHHHHCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GFTIWQYAWYNVALWSLGLLGALIWFTHGVETRLKTLEEVNPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA