| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041306
Identifier: 159041306
GI number: 159041306
Start: 765722
End: 766285
Strand: Reverse
Name: 159041306
Synonym: Cmaq_0732
Alternate gene names: NA
Gene position: 766285-765722 (Counterclockwise)
Preceding gene: 159041307
Following gene: 159041302
Centisome position: 36.88
GC content: 45.21
Gene sequence:
>564_bases ATGAGAGGCCGATGGATTAGCATGAATATTGGATTATTGATTGCTCAAGCATTACTCATAATATGGCCACCCTACGTGGC TAATGCAACCCCTGTTCTAGCTAAGAGGGTTTTCAGGGGTAGGCTTCACCCCATTGACTTTAATAAATCCCTTAAGGATG GTAGGAGGATTCTGGGGGATGGTAAAACCTATGAGGGATTCATAATGGGTGTTACCTTAGGGACACTGGGTGGTTACCTT GTAGTCTACATTATTGGTTCATTAACAGCACCAATACTCAAGTACCCTACAATGCTTGACTCCTTCATAATGTCTGTGGC TGCGCTTTTAGGCGATATGTTGGGTGCCTTCATTAAGAGGAGGCTTGGGTTAAGGAGGGGTGAACCAGCCCCATTACTTG ATCAACTTGACTTCCTCCTAGCCTCCCTACTCTCACTCTACTTAATTGACCCAAGCCTATTACCACTACCAGTGGCTGTA ACCGCAGTGTTAATAACTCCCCCGATTCACTTAGCCACTAATGCTGGTGCATACTTACTTGGTCTTAAGAATGAGCCTTG GTGA
Upstream 100 bases:
>100_bases GCGGGCTTCAGGAAGGGTAGTGTAATGCTTTGGGTTTGCCTGGCCTGTGGTAGAGTGTTTAAGTATAGGTCATCGGCCTT AGCTCACTTATCTACATTCC
Downstream 100 bases:
>100_bases ACCTTAAAAATCAGCCATGCGAGCCTTCTTCACTCACTCAGGACTCGAGATCCACATCACTCAACTGCCTTAATAGGCTT AACCCTTAATACGCTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRGRWISMNIGLLIAQALLIIWPPYVANATPVLAKRVFRGRLHPIDFNKSLKDGRRILGDGKTYEGFIMGVTLGTLGGYL VVYIIGSLTAPILKYPTMLDSFIMSVAALLGDMLGAFIKRRLGLRRGEPAPLLDQLDFLLASLLSLYLIDPSLLPLPVAV TAVLITPPIHLATNAGAYLLGLKNEPW
Sequences:
>Translated_187_residues MRGRWISMNIGLLIAQALLIIWPPYVANATPVLAKRVFRGRLHPIDFNKSLKDGRRILGDGKTYEGFIMGVTLGTLGGYL VVYIIGSLTAPILKYPTMLDSFIMSVAALLGDMLGAFIKRRLGLRRGEPAPLLDQLDFLLASLLSLYLIDPSLLPLPVAV TAVLITPPIHLATNAGAYLLGLKNEPW >Mature_187_residues MRGRWISMNIGLLIAQALLIIWPPYVANATPVLAKRVFRGRLHPIDFNKSLKDGRRILGDGKTYEGFIMGVTLGTLGGYL VVYIIGSLTAPILKYPTMLDSFIMSVAALLGDMLGAFIKRRLGLRRGEPAPLLDQLDFLLASLLSLYLIDPSLLPLPVAV TAVLITPPIHLATNAGAYLLGLKNEPW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002726 [H]
Pfam domain/function: PF01864 DUF46 [H]
EC number: NA
Molecular weight: Translated: 20420; Mature: 20420
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRWISMNIGLLIAQALLIIWPPYVANATPVLAKRVFRGRLHPIDFNKSLKDGRRILGD CCCEEEEEHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC GKTYEGFIMGVTLGTLGGYLVVYIIGSLTAPILKYPTMLDSFIMSVAALLGDMLGAFIKR CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLRRGEPAPLLDQLDFLLASLLSLYLIDPSLLPLPVAVTAVLITPPIHLATNAGAYLL HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEE GLKNEPW ECCCCCC >Mature Secondary Structure MRGRWISMNIGLLIAQALLIIWPPYVANATPVLAKRVFRGRLHPIDFNKSLKDGRRILGD CCCEEEEEHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC GKTYEGFIMGVTLGTLGGYLVVYIIGSLTAPILKYPTMLDSFIMSVAALLGDMLGAFIKR CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLRRGEPAPLLDQLDFLLASLLSLYLIDPSLLPLPVAVTAVLITPPIHLATNAGAYLL HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEE GLKNEPW ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA