| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041302
Identifier: 159041302
GI number: 159041302
Start: 762972
End: 763475
Strand: Reverse
Name: 159041302
Synonym: Cmaq_0728
Alternate gene names: NA
Gene position: 763475-762972 (Counterclockwise)
Preceding gene: 159041306
Following gene: 159041301
Centisome position: 36.75
GC content: 37.1
Gene sequence:
>504_bases GTGTCGGTTAGGTATTTACGTTTAGGTAACACAATAAGCCTAATTGCAGGAGTCTTAATACTACTGGTTCTCTTAGGAAT AATGATTCATGGGATACAAGCAGTGTTTTACCTATGGGTTTTAGTAGTAATGTGGATGCTTTGGGTCATGGGAATTGCAG CCTACGTATCCTATGTTTTAGCCGCCTTAAAGATTAGGCAGTTAATGAAGTATGCCGGTGTATTAGCATTGATAGTAACA TTAATGGGTTTAATACTGCTTACTGAACATAAGATGCTTGGTGCCGAATTAATAGTCTTAGGCTACTTCCTAGAACCCAT AGCTGGTGTATCCCTTTACTTAAGATTACTTGACTTCAATAAACCAGCAGCACACGTGTTCTTCTGGGGTGCCGTTATAT TTACCGTGGGTTTACCCTTAATACTGATTAAGAATACTTACATCTCATTAATAGGTGATTTAATTAAAACAATTGGGCTC ATAATCCTAATACTTAAAGATTAG
Upstream 100 bases:
>100_bases CCCAGGGCTTTTTTCCAGCTCAATAATGAAACTATGATTATTATACTGAATATTTCATGGATTAATAAATTATTATAAAG TCAGGTGAGATCACTGGGGT
Downstream 100 bases:
>100_bases TCACTCAACTTGACTTAACTGAGATGCGGCATCCCATGGTATTAAGTTTAAGGAAGTAGACCCAGATAATAATGAGAAAA CCTTAAAAGCCCAATAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSVRYLRLGNTISLIAGVLILLVLLGIMIHGIQAVFYLWVLVVMWMLWVMGIAAYVSYVLAALKIRQLMKYAGVLALIVT LMGLILLTEHKMLGAELIVLGYFLEPIAGVSLYLRLLDFNKPAAHVFFWGAVIFTVGLPLILIKNTYISLIGDLIKTIGL IILILKD
Sequences:
>Translated_167_residues MSVRYLRLGNTISLIAGVLILLVLLGIMIHGIQAVFYLWVLVVMWMLWVMGIAAYVSYVLAALKIRQLMKYAGVLALIVT LMGLILLTEHKMLGAELIVLGYFLEPIAGVSLYLRLLDFNKPAAHVFFWGAVIFTVGLPLILIKNTYISLIGDLIKTIGL IILILKD >Mature_166_residues SVRYLRLGNTISLIAGVLILLVLLGIMIHGIQAVFYLWVLVVMWMLWVMGIAAYVSYVLAALKIRQLMKYAGVLALIVTL MGLILLTEHKMLGAELIVLGYFLEPIAGVSLYLRLLDFNKPAAHVFFWGAVIFTVGLPLILIKNTYISLIGDLIKTIGLI ILILKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18571; Mature: 18439
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRYLRLGNTISLIAGVLILLVLLGIMIHGIQAVFYLWVLVVMWMLWVMGIAAYVSYVL CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALKIRQLMKYAGVLALIVTLMGLILLTEHKMLGAELIVLGYFLEPIAGVSLYLRLLDFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPAAHVFFWGAVIFTVGLPLILIKNTYISLIGDLIKTIGLIILILKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVRYLRLGNTISLIAGVLILLVLLGIMIHGIQAVFYLWVLVVMWMLWVMGIAAYVSYVL CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALKIRQLMKYAGVLALIVTLMGLILLTEHKMLGAELIVLGYFLEPIAGVSLYLRLLDFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPAAHVFFWGAVIFTVGLPLILIKNTYISLIGDLIKTIGLIILILKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA