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The map label for this gene is rhaB [H]

Identifier: 159041283

GI number: 159041283

Start: 743243

End: 744739

Strand: Reverse

Name: rhaB [H]

Synonym: Cmaq_0709

Alternate gene names: 159041283

Gene position: 744739-743243 (Counterclockwise)

Preceding gene: 159041284

Following gene: 159041282

Centisome position: 35.85

GC content: 41.28

Gene sequence:

>1497_bases
ATGGATTCAATAGTAATATTAGCTATAGATATAGGTGCAAGTGGGGGTAAGGCTATTGCCGGTGTATTGGATTTAAAGAA
CCTTAAGTTAACTATAGATGAATTATATAGGTTCCCTAACCAAATGATTAGGGTTAATAACCACCTATACTGGGATATGC
TTCAACTATGGGCTGAGGTTAAGAATTCAATTAAAGCCGCCTTAAGGAAGTATAGGGGTAGATTAGCCTCAGTGGGTATT
GATACTTGGGGTGTTGACTTCGTACTGCTTGATGACCATGATGAGTTAGTGAGCTTACCCTACGCCTACAGGGATCCTAT
GACTGAAGGATTAATGAGTGAAGTCTTCAGTAAGGTACCTAAGGAAGTCATATATAGTAGGACTGGTATACAGTTCATGC
GCATTAACACCCTTTACCAACTCTACGCCCTAGTTAAGTTTAATTCACCTAAACTGAAGATTGCTAAGGCAATGCTCATG
ATACCTGACTTACTTAATTACTGGTTAAGCGGCGTTAAGGTTAATGAATACACCAATGCATCAACCACTCAATTACTTGA
TGCCAAGAGTAAAAGGTGGTGTTTAGACATACTGGAGAAACTCAATATACCTACTGACATTCTTCAGGAAATAGTTAATG
CTGGATCCGTTTTAGGCTACTTAAAGAGGGACGTTGTGGAGGAGTTGGGTGAGGACAGTAGGGATGTCAACGTGATAGCG
CCTGCAACGCATGATACTGCCTCCGCCATTGCGGCTGGGCCAATGATTAATGAGGATACTGGCTACGTGAGTTCAGGGAC
TTGGAATCTTGTTGGAGTGGAGTTGAATGAACCCTTAATTAATGAACAAGCCATGTTAAGCAACTTCACTAATGAAGGCG
GTGCCTTCGGTACAATTACCTTCTTAAGGAATATGCAGGGCATGTGGATACTGCAGGAGGTTAGGAGAATACTAGTGGAT
TTAAGTGGAAGGGAGTACTCTTACGATGAGTTAGTTAACCTTGCGGCTGAGGCTGAGGAACCTGAATCCTTCATAGATGT
TGATGATTCAAGGTTCTTGGCTCCAATTAATATGATTAATGAGATCCACGGTTACCTTAAGGAAACTAGGCAGAGGGAAC
CAGGGAGCTTAGGTGAATTAATTAGGCTTATTATAACCAGTATAGCCTTGAAGCATAGGTATATATTTGAGAAAGCGACT
AAGATAACTGGTAGGAGACTGAGGGGAATCAACATATTTGGTGGTGGCTCTAGGAACAGTCTCATGAATCAATTAACAGC
CAATGTAATGGGGATTCCTGTCTACGCGGGACCTGAAGAATCAACATCAATTGGGAACATTCTAATTCAGGCAGCTGGCA
TGGGCATTATTAAGTCCATTCAGGAACTTAGATCCATAGTTAGGGATTCATTCAATATTAGGGTCTTTGAACCAAGGGAT
GAGAAGAAGTATGAGGATTTATACTCAATATTCGTGACTAGACTTAACCTACCCTAA

Upstream 100 bases:

>100_bases
TGGGCTGGGATGAGAATGGTATACCAACTAGGGAGACTCTTAAGGAATTGGGAATACTGCCAATAGTGGAGAGATTCATG
AATAATAAGTGAGAGGCAGC

Downstream 100 bases:

>100_bases
CCTGTTTAATGATTAATGATGGCTATAACTTAAAAGTAAACTAATGCTTAATTCAGTTAATGAGCATGAGTATAAGTAGG
TTAAAGTCAACCTACTCAGG

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MDSIVILAIDIGASGGKAIAGVLDLKNLKLTIDELYRFPNQMIRVNNHLYWDMLQLWAEVKNSIKAALRKYRGRLASVGI
DTWGVDFVLLDDHDELVSLPYAYRDPMTEGLMSEVFSKVPKEVIYSRTGIQFMRINTLYQLYALVKFNSPKLKIAKAMLM
IPDLLNYWLSGVKVNEYTNASTTQLLDAKSKRWCLDILEKLNIPTDILQEIVNAGSVLGYLKRDVVEELGEDSRDVNVIA
PATHDTASAIAAGPMINEDTGYVSSGTWNLVGVELNEPLINEQAMLSNFTNEGGAFGTITFLRNMQGMWILQEVRRILVD
LSGREYSYDELVNLAAEAEEPESFIDVDDSRFLAPINMINEIHGYLKETRQREPGSLGELIRLIITSIALKHRYIFEKAT
KITGRRLRGINIFGGGSRNSLMNQLTANVMGIPVYAGPEESTSIGNILIQAAGMGIIKSIQELRSIVRDSFNIRVFEPRD
EKKYEDLYSIFVTRLNLP

Sequences:

>Translated_498_residues
MDSIVILAIDIGASGGKAIAGVLDLKNLKLTIDELYRFPNQMIRVNNHLYWDMLQLWAEVKNSIKAALRKYRGRLASVGI
DTWGVDFVLLDDHDELVSLPYAYRDPMTEGLMSEVFSKVPKEVIYSRTGIQFMRINTLYQLYALVKFNSPKLKIAKAMLM
IPDLLNYWLSGVKVNEYTNASTTQLLDAKSKRWCLDILEKLNIPTDILQEIVNAGSVLGYLKRDVVEELGEDSRDVNVIA
PATHDTASAIAAGPMINEDTGYVSSGTWNLVGVELNEPLINEQAMLSNFTNEGGAFGTITFLRNMQGMWILQEVRRILVD
LSGREYSYDELVNLAAEAEEPESFIDVDDSRFLAPINMINEIHGYLKETRQREPGSLGELIRLIITSIALKHRYIFEKAT
KITGRRLRGINIFGGGSRNSLMNQLTANVMGIPVYAGPEESTSIGNILIQAAGMGIIKSIQELRSIVRDSFNIRVFEPRD
EKKYEDLYSIFVTRLNLP
>Mature_498_residues
MDSIVILAIDIGASGGKAIAGVLDLKNLKLTIDELYRFPNQMIRVNNHLYWDMLQLWAEVKNSIKAALRKYRGRLASVGI
DTWGVDFVLLDDHDELVSLPYAYRDPMTEGLMSEVFSKVPKEVIYSRTGIQFMRINTLYQLYALVKFNSPKLKIAKAMLM
IPDLLNYWLSGVKVNEYTNASTTQLLDAKSKRWCLDILEKLNIPTDILQEIVNAGSVLGYLKRDVVEELGEDSRDVNVIA
PATHDTASAIAAGPMINEDTGYVSSGTWNLVGVELNEPLINEQAMLSNFTNEGGAFGTITFLRNMQGMWILQEVRRILVD
LSGREYSYDELVNLAAEAEEPESFIDVDDSRFLAPINMINEIHGYLKETRQREPGSLGELIRLIITSIALKHRYIFEKAT
KITGRRLRGINIFGGGSRNSLMNQLTANVMGIPVYAGPEESTSIGNILIQAAGMGIIKSIQELRSIVRDSFNIRVFEPRD
EKKYEDLYSIFVTRLNLP

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=486, Percent_Identity=37.2427983539095, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1789168, Length=510, Percent_Identity=26.6666666666667, Blast_Score=118, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 56000; Mature: 56000

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIVILAIDIGASGGKAIAGVLDLKNLKLTIDELYRFPNQMIRVNNHLYWDMLQLWAEV
CCCEEEEEEEECCCCCCHHHHHEECCCCEEEHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
KNSIKAALRKYRGRLASVGIDTWGVDFVLLDDHDELVSLPYAYRDPMTEGLMSEVFSKVP
HHHHHHHHHHHHCHHHHCCCCCCCEEEEEECCCHHHHCCCCHHCCHHHHHHHHHHHHHHH
KEVIYSRTGIQFMRINTLYQLYALVKFNSPKLKIAKAMLMIPDLLNYWLSGVKVNEYTNA
HHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
STTQLLDAKSKRWCLDILEKLNIPTDILQEIVNAGSVLGYLKRDVVEELGEDSRDVNVIA
CHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
PATHDTASAIAAGPMINEDTGYVSSGTWNLVGVELNEPLINEQAMLSNFTNEGGAFGTIT
CCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHH
FLRNMQGMWILQEVRRILVDLSGREYSYDELVNLAAEAEEPESFIDVDDSRFLAPINMIN
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEEHHHHHHH
EIHGYLKETRQREPGSLGELIRLIITSIALKHRYIFEKATKITGRRLRGINIFGGGSRNS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
LMNQLTANVMGIPVYAGPEESTSIGNILIQAAGMGIIKSIQELRSIVRDSFNIRVFEPRD
HHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCC
EKKYEDLYSIFVTRLNLP
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSIVILAIDIGASGGKAIAGVLDLKNLKLTIDELYRFPNQMIRVNNHLYWDMLQLWAEV
CCCEEEEEEEECCCCCCHHHHHEECCCCEEEHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
KNSIKAALRKYRGRLASVGIDTWGVDFVLLDDHDELVSLPYAYRDPMTEGLMSEVFSKVP
HHHHHHHHHHHHCHHHHCCCCCCCEEEEEECCCHHHHCCCCHHCCHHHHHHHHHHHHHHH
KEVIYSRTGIQFMRINTLYQLYALVKFNSPKLKIAKAMLMIPDLLNYWLSGVKVNEYTNA
HHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCC
STTQLLDAKSKRWCLDILEKLNIPTDILQEIVNAGSVLGYLKRDVVEELGEDSRDVNVIA
CHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
PATHDTASAIAAGPMINEDTGYVSSGTWNLVGVELNEPLINEQAMLSNFTNEGGAFGTIT
CCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHH
FLRNMQGMWILQEVRRILVDLSGREYSYDELVNLAAEAEEPESFIDVDDSRFLAPINMIN
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEEHHHHHHH
EIHGYLKETRQREPGSLGELIRLIITSIALKHRYIFEKATKITGRRLRGINIFGGGSRNS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
LMNQLTANVMGIPVYAGPEESTSIGNILIQAAGMGIIKSIQELRSIVRDSFNIRVFEPRD
HHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCC
EKKYEDLYSIFVTRLNLP
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]