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The map label for this gene is 159041256

Identifier: 159041256

GI number: 159041256

Start: 713655

End: 714089

Strand: Reverse

Name: 159041256

Synonym: Cmaq_0678

Alternate gene names: NA

Gene position: 714089-713655 (Counterclockwise)

Preceding gene: 159041265

Following gene: 159041255

Centisome position: 34.37

GC content: 48.05

Gene sequence:

>435_bases
GTGTCCATTAATCCGCCTGTGGCCATGGTTAAGTCGCCTAAGGATGGGAAGATGAAGCAGGGTAGAGGATTCTCCATTAG
TGAGATTAAGGCCATTAACTTAACTGTTAATGAGGCTAGGCTGTTAGGTATACCTGTTGATACCAGGCGTAAATCAACCT
GGGAGTGGAATGTTAAGGCTCTTCAGGAGTACGTGAGTAAGGTAGTTAATGTTACTGATGTATCCCAGTTACCATTACCC
TCAATACCCAAGAGGAGACTGGTAAAGCCTAAGAGAGGGAGGGCTTTCAGGGGTGTTACACCAGCGGGTAGGAGGGCTAG
GGGTCTCCTTAGTATTGGTTTAAGGGAGACTCATAGGTATAAGTGGAGGAGGAAGCAGAGGCAGCGTGAGTTGAAGCTTA
GGCATGAGGTAGTCTTCCGTAAGGGAGGCGCGTAA

Upstream 100 bases:

>100_bases
AGTGAATTCACTGCTTTAATTAAATAAGGGGAAGTGGATCTAATGTTTAGTTTAACATGGTTCAGTAAAGCTTATTAATG
CCTTGGCCTAAGGTTTAACC

Downstream 100 bases:

>100_bases
GCAAACATTATGTAAGTTATGGTTAATCATAGGCTTCATTGATTCACGAATAGGGATTACTGAGTTAAGGGGAATGTTTT
ATAACTGATTCACTCACCTA

Product: 50S ribosomal protein L13

Products: NA

Alternate protein names: 50S Ribosomal E

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSINPPVAMVKSPKDGKMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKSTWEWNVKALQEYVSKVVNVTDVSQLPLP
SIPKRRLVKPKRGRAFRGVTPAGRRARGLLSIGLRETHRYKWRRKQRQRELKLRHEVVFRKGGA

Sequences:

>Translated_144_residues
MSINPPVAMVKSPKDGKMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKSTWEWNVKALQEYVSKVVNVTDVSQLPLP
SIPKRRLVKPKRGRAFRGVTPAGRRARGLLSIGLRETHRYKWRRKQRQRELKLRHEVVFRKGGA
>Mature_143_residues
SINPPVAMVKSPKDGKMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKSTWEWNVKALQEYVSKVVNVTDVSQLPLPS
IPKRRLVKPKRGRAFRGVTPAGRRARGLLSIGLRETHRYKWRRKQRQRELKLRHEVVFRKGGA

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16518; Mature: 16387

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINPPVAMVKSPKDGKMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKSTWEWNVKA
CCCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCEEEEECCCCCCCCCCEEECHHH
LQEYVSKVVNVTDVSQLPLPSIPKRRLVKPKRGRAFRGVTPAGRRARGLLSIGLRETHRY
HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCHHHHHHHHCHHHHHHH
KWRRKQRQRELKLRHEVVFRKGGA
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SINPPVAMVKSPKDGKMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKSTWEWNVKA
CCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEEECCEEEEECCCCCCCCCCEEECHHH
LQEYVSKVVNVTDVSQLPLPSIPKRRLVKPKRGRAFRGVTPAGRRARGLLSIGLRETHRY
HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCHHHHHHHHCHHHHHHH
KWRRKQRQRELKLRHEVVFRKGGA
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA