| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041226
Identifier: 159041226
GI number: 159041226
Start: 684254
End: 685102
Strand: Reverse
Name: 159041226
Synonym: Cmaq_0648
Alternate gene names: NA
Gene position: 685102-684254 (Counterclockwise)
Preceding gene: 159041229
Following gene: 159041225
Centisome position: 32.98
GC content: 43.35
Gene sequence:
>849_bases ATGGGCATGCCTAATCAACCTGGGTGTGTTAAAGGCCTAATGAGCTTAAGTGGCTTAGGCTTAAGGCCATTAACAGTATC AGTGGCCTTCACCAGTGGACCAAAGGGTGGTACTGGTAAGAGTACGCTAGTGGCTAATATAGCGGCAATGATTGATGAAC CAGTGGTCATCCTTGACCTAGGCTTTGATGGTAATGTAACAGCCAGTAGGCTTCATAAGGTTGAGTACACTGATGAATCC AGCGGCTTCATAGACTACGTCGCCTATGGATCTGAGTTAAACATTGTTGAGTCCAAGGAGGAACCTAACGTTAAATTCAT TCCACCTGGCTCATTTAGGAGCTTGAAGATACCTAAGATTGTATTCTCCATGCCCCTTGAAGCCATGGCTAATAGGCTCT CTAACATGGTTGCCCTGCTGGCTAAGAACGGATTATCAATACTACTCATAGATCTTCCATCAAATCCAAGTTTCCTAGGT CCACTTTACCCACTCCTACTGTACTACAGTGACATCATTAATGTAGTTATTGAACCTGGTCAAGTCTACATGGGGGTGTT GAGTGAATTGTACAGGTGGTTAATTAAGGTCGTTGATGATGAATCCATGGTTAACGTAATAGTTAACAAGTATCATGAAT ACTTCGACGGTTACCCAAAGGAGGCTAATAGGTATGTCATAAGGGGTAAGGTGTACTTAATCAGACTTGACCCAGTGGCC ATGGCTCTTACCCTGAAGGGTGAATTAGCGGTTAAGTATAGGGAGGCGGCTGTATTCAGGAAGTCTATTGATGAATTAAC TAAGGATGTGGTTAATCAAGTAAGCATGTACATGGGGGTGGTTAAATGA
Upstream 100 bases:
>100_bases ATTCACTTAACCTGCCTTTCAATAATGACTTTAAGAGGCACCATAAGTGATTTAAAATTAAGCCAGATGTAGGGTATGAT TGCTTTCAACATGCACCTAC
Downstream 100 bases:
>100_bases TGAAGGATATTGATAGGATTAGGAGAATAATAATGGAGGATGATGGTAATGCTGCACAGGTTAATCAACCAGTATCCATG AAGAGGAGTAAGACTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGMPNQPGCVKGLMSLSGLGLRPLTVSVAFTSGPKGGTGKSTLVANIAAMIDEPVVILDLGFDGNVTASRLHKVEYTDES SGFIDYVAYGSELNIVESKEEPNVKFIPPGSFRSLKIPKIVFSMPLEAMANRLSNMVALLAKNGLSILLIDLPSNPSFLG PLYPLLLYYSDIINVVIEPGQVYMGVLSELYRWLIKVVDDESMVNVIVNKYHEYFDGYPKEANRYVIRGKVYLIRLDPVA MALTLKGELAVKYREAAVFRKSIDELTKDVVNQVSMYMGVVK
Sequences:
>Translated_282_residues MGMPNQPGCVKGLMSLSGLGLRPLTVSVAFTSGPKGGTGKSTLVANIAAMIDEPVVILDLGFDGNVTASRLHKVEYTDES SGFIDYVAYGSELNIVESKEEPNVKFIPPGSFRSLKIPKIVFSMPLEAMANRLSNMVALLAKNGLSILLIDLPSNPSFLG PLYPLLLYYSDIINVVIEPGQVYMGVLSELYRWLIKVVDDESMVNVIVNKYHEYFDGYPKEANRYVIRGKVYLIRLDPVA MALTLKGELAVKYREAAVFRKSIDELTKDVVNQVSMYMGVVK >Mature_281_residues GMPNQPGCVKGLMSLSGLGLRPLTVSVAFTSGPKGGTGKSTLVANIAAMIDEPVVILDLGFDGNVTASRLHKVEYTDESS GFIDYVAYGSELNIVESKEEPNVKFIPPGSFRSLKIPKIVFSMPLEAMANRLSNMVALLAKNGLSILLIDLPSNPSFLGP LYPLLLYYSDIINVVIEPGQVYMGVLSELYRWLIKVVDDESMVNVIVNKYHEYFDGYPKEANRYVIRGKVYLIRLDPVAM ALTLKGELAVKYREAAVFRKSIDELTKDVVNQVSMYMGVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31053; Mature: 30922
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMPNQPGCVKGLMSLSGLGLRPLTVSVAFTSGPKGGTGKSTLVANIAAMIDEPVVILDL CCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE GFDGNVTASRLHKVEYTDESSGFIDYVAYGSELNIVESKEEPNVKFIPPGSFRSLKIPKI CCCCCCHHHHEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCEEEECCCCCCCEECCHH VFSMPLEAMANRLSNMVALLAKNGLSILLIDLPSNPSFLGPLYPLLLYYSDIINVVIEPG HHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCC QVYMGVLSELYRWLIKVVDDESMVNVIVNKYHEYFDGYPKEANRYVIRGKVYLIRLDPVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCEE MALTLKGELAVKYREAAVFRKSIDELTKDVVNQVSMYMGVVK EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GMPNQPGCVKGLMSLSGLGLRPLTVSVAFTSGPKGGTGKSTLVANIAAMIDEPVVILDL CCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE GFDGNVTASRLHKVEYTDESSGFIDYVAYGSELNIVESKEEPNVKFIPPGSFRSLKIPKI CCCCCCHHHHEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCEEEECCCCCCCEECCHH VFSMPLEAMANRLSNMVALLAKNGLSILLIDLPSNPSFLGPLYPLLLYYSDIINVVIEPG HHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCC QVYMGVLSELYRWLIKVVDDESMVNVIVNKYHEYFDGYPKEANRYVIRGKVYLIRLDPVA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCEE MALTLKGELAVKYREAAVFRKSIDELTKDVVNQVSMYMGVVK EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA